B_subtilis <- read.table("C:/Users/Chris/git-test/BInfo_528_Assignment4/B_subtilis_168.ptt", sep="\t", header=TRUE, skip=2)## Warning in scan(file = file, what = what, sep = sep, quote = quote, dec = dec,
## : EOF within quoted stringB_subtilis <- na.omit(B_subtilis)
# Function to split and convert a single value
extract_numbers <- function(value) {
parts <- unlist(strsplit(value, "\\.."))
return(as.numeric(parts))
}
# Apply the function to the whole column and create two new columns
numbers <- t(sapply(B_subtilis$Location, extract_numbers))
B_subtilis$Start <- numbers[, 1]
B_subtilis$End <- numbers[, 2]
B_subtilis <- na.omit(B_subtilis)
View(B_subtilis)
# Loop through each row of the df
B_subtilis_operon=data.frame()
for(i in 1:(nrow(B_subtilis) - 1)) {
if(!is.na(B_subtilis$Strand[i]) && !is.na(B_subtilis$Strand[i + 1]) && B_subtilis$Strand[i] == B_subtilis$Strand[i+1]) {
if((B_subtilis$Start[i+1]-B_subtilis$End[i] ) < 50) {
B_subtilis_operon <- rbind(B_subtilis_operon, B_subtilis[i, ])
}
}
}
# Print the results
print(B_subtilis_operon)## Location Strand Length PID Gene Synonym Code COG
## 3 3206..3421 + 71 16077071 yaaA BSU00030 - COG2501S
## 4 3437..4549 + 370 16077072 recF BSU00040 - COG1195L
## 10 41657..42484 + 275 16077100 yaaT BSU00320 - COG1774S
## 12 42917..43660 + 247 16077102 yabB BSU00340 - COG4123R
## 13 43647..43946 + 99 16077103 yazA BSU00350 - COG2827L
## 19 50087..50647 + 186 16077109 rnmV BSU00410 - COG1658L
## 25 54441..55298 + 285 16077115 purR BSU00470 - COG0503F
## 28 56352..57722 + 456 16077118 glmU BSU00500 - COG1207M
## 35 64817..66415 + 532 16077125 yabM BSU00570 - COG2244R
## 36 66405..67874 + 489 16077126 yabN BSU00580 - COG3956R
## 38 68216..68518 + 100 16077128 yabP BSU00600 - -
## 39 68515..69150 + 211 16077129 yabQ BSU00610 - -
## 43 73106..73843 + 245 16077133 yabS BSU00650 - COG2304R
## 45 74929..76347 + 472 16077135 tilS BSU00670 - COG0037D
## 48 79092..79868 + 258 255767018 coaX BSU00700 - COG1521K
## 49 79880..80755 + 291 16077139 hslO BSU00710 - COG1281O
## 52 82864..84276 + 470 16077142 pabB BSU00740 - COG0147EH
## 53 84290..84874 + 194 16077143 pabA BSU00750 - COG0512EH
## 54 84874..85755 + 293 16077144 pabC BSU00760 - COG0115EH
## 55 85737..86594 + 285 16077145 sul BSU00770 - COG0294H
## 56 86587..86949 + 120 16077146 folB BSU00780 - COG1539H
## 57 86946..87449 + 167 16077147 folK BSU00790 - COG0801H
## 58 87401..87610 + 69 16077148 yazB BSU00800 - COG1476K
## 61 101449..101913 + 154 16077151 ctsR BSU00830 - COG4463K
## 62 101927..102484 + 185 16077152 mcsA BSU00840 - COG3880S
## 63 102484..103575 + 363 16077153 mcsB BSU00850 - COG3869E
## 65 106096..107472 + 458 16077155 radA BSU00870 - COG1066O
## 67 108674..109774 + 366 16077157 yacL BSU00890 - COG4956R
## 68 109789..110487 + 232 16077158 ispD BSU00900 - COG1211I
## 71 112800..113453 + 217 16077161 cysE BSU00930 - COG1045E
## 72 113450..114850 + 466 16077162 cysS BSU00940 - COG0215J
## 73 114854..115285 + 143 16077163 mrnC BSU00950 - COG1939S
## 74 115269..116018 + 249 16077164 rlmB BSU00960 - COG0566J
## 77 117349..117498 + 49 16077167 rpmG BSU00990 - COG0267J
## 82 120061..120561 + 166 255767021 rplJ BSU01040 - COG0244J
## 89 518657..518938 + 93 16077532 endB BSU04650 - COG0864K
## 91 519408..520232 + 274 16077534 rsbRA BSU04670 - COG1366T
## 92 520237..520602 + 121 16077535 rsbS BSU04680 - COG1366T
## 93 520606..521007 + 133 16077536 rsbT BSU04690 - COG2172T
## 95 522088..522417 + 109 16077538 rsbV BSU04710 - COG1366T
## 96 522414..522896 + 160 16077539 rsbW BSU04720 - COG2172T
## 97 522862..523650 + 262 255767137 sigB BSU04730 - COG1191K
## 99 524492..524785 + 97 16077542 ydcF BSU04750 - COG3843U
## 100 524782..525222 + 146 16077543 ydcG BSU04760 - -
## 104 529505..530611 - 368 16077547 ydcL BSU04800 - COG4974L
## 105 530624..531133 - 169 16077548 immA BSU04810 - COG2856E
## 107 531787..531981 + 64 16077550 sacV BSU04830 - -
## 110 532922..533302 + 126 16077552 ydcP BSU04850 - -
## 111 533338..534780 + 480 16077553 ydcQ BSU04860 - COG1674D
## 113 536096..536365 + 89 16077555 ydcS BSU04880 - -
## 114 536404..536670 + 88 16077556 ydcT BSU04890 - -
## 115 536687..536995 + 102 16077557 yddA BSU04900 - -
## 116 536985..538049 + 354 16077558 yddB BSU04910 - -
## 117 538061..538309 + 82 16077559 yddC BSU04920 - -
## 118 538322..538846 + 174 16077560 yddD BSU04930 - -
## 119 538836..541229 + 797 255767139 yddE BSU04940 - COG3451U
## 120 541248..541574 + 108 16077562 yddF BSU04950 - -
## 121 541578..544025 + 815 16077563 yddG BSU04960 - COG4372S
## 122 544022..545011 + 329 16077564 yddH BSU04970 - COG0791M
## 126 547306..548481 + 391 16077568 rapI BSU05010 - -
## 135 556562..556738 + 58 255767140 ydzM BSU05099 - -
## 161 579541..579876 + 111 16077600 aseR BSU05330 - COG0640K
## 169 587157..587336 - 59 255767143 ydzP BSU05408 - -
## 171 587744..588967 + 407 16077608 ydfH BSU05410 - COG4585T
## 178 596478..597098 + 206 16077615 ydfN BSU05480 - COG0778C
## 186 601741..602172 - 143 16077622 cotP BSU05550 - COG0071O
## 187 602185..602427 - 80 16077623 ydgA BSU05560 - -
## 189 603012..603599 + 195 16077625 ydgC BSU05580 - COG1309K
## 195 608933..609391 + 152 16077631 ydgG BSU05640 - COG1846K
## 197 612191..612820 - 209 16077633 ydgI BSU05660 - COG0778C
## 207 622293..622790 - 165 16077643 ydhH BSU05760 - -
## 212 626622..626933 + 103 16077648 gmuB BSU05810 - COG1440G
## 213 626933..627265 + 110 255767151 gmuA BSU05820 - COG1447G
## 214 627284..628612 + 442 16077650 gmuC BSU05830 - COG1455G
## 216 630170..630883 + 237 16077652 gmuR BSU05850 - COG2188K
## 217 630912..631811 + 299 16077653 gmuE BSU05860 - COG1940KG
## 218 631808..632755 + 315 16077654 gmuF BSU05870 - COG1482G
## 220 640662..641639 + 325 16077657 thiL BSU05900 - COG0611H
## 221 641654..642130 + 158 16077658 ydiB BSU05910 - COG0802R
## 222 642111..642800 + 229 16077659 ydiC BSU05920 - COG1214O
## 223 642810..643265 + 151 16077660 rimI BSU05930 - COG0456R
## 226 646582..647094 + 170 16077663 moaC BSU05960 - COG0315H
## 227 647091..647738 + 215 16077664 ydiH BSU05970 - COG2344R
## 228 647760..647933 + 57 16077665 tatAY BSU05980 - COG1826U
## 230 648742..648933 - 63 16077667 ydiK BSU06000 - -
## 232 649903..650187 + 94 50812190 groES BSU06020 - COG0234O
## 236 655223..656506 + 427 16077673 ydiO BSU06060 - COG0270L
## 238 659623..660564 + 313 16077676 ydiR BSU06090 - -
## 239 660596..661627 + 343 16077677 ydiS BSU06100 - COG1401V
## 248 671994..673019 + 341 16077686 ydjG BSU06190 - COG1198L
## 249 673019..673783 + 254 16077687 ydjH BSU06200 - COG1512R
## 258 681547..682362 - 271 16077695 ydjP BSU06280 - COG0596R
## 261 685155..686564 - 469 255767156 gabP BSU06310 - COG1113E
## 264 688184..689146 + 320 255767158 yeaC BSU06330 - COG0714R
## 265 689146..690342 + 398 255767159 yeaD BSU06340 - COG1721R
## 271 697538..698092 + 184 50812193 yebE BSU06400 - COG4843S
## 273 698612..699100 + 162 16077710 purE BSU06420 - COG0041F
## 274 699093..700235 + 380 255767163 purK BSU06430 - COG0026F
## 276 701601..702326 + 241 16077713 purC BSU06450 - COG0152F
## 277 702319..702573 + 84 16077714 purS BSU06460 - COG1828F
## 278 702570..703253 + 227 16077715 purQ BSU06470 - COG0047F
## 279 703237..705465 + 742 255767164 purL BSU06480 - COG0046F
## 281 706973..708013 + 346 255767166 purM BSU06500 - COG0150F
## 282 708010..708597 + 195 255767167 purN BSU06510 - COG0299F
## 283 708594..710132 + 512 255767168 purH BSU06520 - COG0138F
## 288 713664..715406 + 580 16077724 yerA BSU06560 - COG1001F
## 289 715433..716428 + 331 16077725 yerB BSU06570 - -
## 293 719370..721589 + 739 16077729 pcrA BSU06610 - COG0210L
## 294 721613..723619 + 668 16077730 ligA BSU06620 - COG0272L
## 299 728732..729022 + 96 16077735 gatC BSU06670 - COG0721J
## 300 729038..730495 + 485 16077736 gatA BSU06680 - COG0154J
## 308 740288..742927 + 879 16077744 yeeA BSU06760 - COG1002V
## 313 747079..747534 - 151 255767175 yezG BSU06811 - -
## 316 750959..752089 + 376 255767178 rapH BSU06830 - -
## 321 754480..754923 + 147 16077754 yesE BSU06870 - COG3631R
## 323 755907..756155 + 82 16077756 cotJA BSU06890 - -
## 324 756139..756402 + 87 255767181 cotJB BSU06900 - -
## 326 757111..757653 + 180 16077759 yesJ BSU06920 - COG2153R
## 328 758093..758722 + 209 16077761 yesL BSU06940 - COG5578S
## 329 758719..760452 + 577 16077762 yesM BSU06950 - COG2972T
## 331 761662..762945 + 427 255767183 yesO BSU06970 - COG1653G
## 332 762942..763871 + 309 16077765 yesP BSU06980 - COG1175G
## 333 763875..764765 + 296 16077766 yesQ BSU06990 - COG0395G
## 334 764781..765815 + 344 16077767 yesR BSU07000 - COG4225R
## 335 765838..768123 + 761 16077768 yesS BSU07010 - COG4753T
## 336 768137..768835 + 232 16077769 rhgT BSU07020 - COG2755E
## 337 768828..769490 + 220 16077770 yesU BSU07030 - -
## 339 770234..772096 + 620 16077772 yesW BSU07050 - -
## 341 774138..774791 + 217 16077774 yesY BSU07070 - COG2755E
## 342 774799..776790 + 663 16077775 yesZ BSU07080 - COG1874G
## 345 781092..782048 + 318 16077778 lplB BSU07110 - COG4209G
## 346 782062..782949 + 295 16077779 lplC BSU07120 - COG0395G
## 352 787992..788636 + 214 16077787 yetJ BSU07200 - COG0670R
## 360 799303..800208 + 301 16077795 yfnG BSU07280 - COG0451MG
## 361 800232..801143 + 303 16077796 yfnF BSU07290 - -
## 362 801172..802350 + 392 16077797 yfnE BSU07300 - COG1216R
## 367 807091..808548 + 485 16077802 yfmT BSU07350 - COG1012C
## 380 822903..823703 - 266 16077816 yfmF BSU07490 - COG1120PH
## 381 823716..824717 - 333 16077817 yfmE BSU07500 - COG0609P
## 385 827252..827419 + 55 16077821 yfmA BSU07540 - -
## 389 830945..832573 + 542 16077825 citS BSU07580 - COG3290T
## 390 832545..833225 + 226 16077826 citT BSU07590 - COG4565KT
## 403 844097..844234 + 45 16077839 yflD BSU07720 - -
## 406 846182..847258 - 358 16077843 yfkT BSU07760 - -
## 407 847282..847482 - 66 16077844 yfkS BSU07770 - -
## 408 847498..848652 - 384 16077845 yfkR BSU07780 - -
## 411 851850..853535 + 561 16077848 treA BSU07810 - COG0366G
## 418 862004..862474 + 156 16077855 yfkJ BSU07880 - COG0394T
## 419 862492..862812 + 106 16077856 yfkI BSU07890 - -
## 424 867164..868006 - 280 16077861 yfkC BSU07940 - COG0668M
## 434 877599..878051 + 150 16077871 yfjM BSU08040 - -
## 436 879002..880003 + 333 16077873 acoA BSU08060 - COG1071C
## 437 880007..881035 + 342 16077874 acoB BSU08070 - COG0022C
## 438 881049..882245 + 398 16077875 acoC BSU08080 - COG0508C
## 444 886775..887332 - 185 16077881 yfjD BSU08140 - -
## 445 887364..888131 - 255 16077882 yfjC BSU08150 - -
## 446 888143..889366 - 407 16077883 yfjB BSU08160 - COG3941R
## 449 891436..892200 + 254 16077886 malR BSU08190 - COG1737K
## 451 893904..895625 + 573 16077888 malQ BSU08210 - COG1132V
## 453 897588..897992 + 134 16077890 catD BSU08230 - COG2259S
## 456 900080..901528 + 482 16077893 yfiG BSU08260 - COG2814G
## 457 901555..902496 + 313 16077894 yfiH BSU08270 - COG1082G
## 459 903811..905013 + 400 16077896 yfiJ BSU08290 - COG4585T
## 461 905816..906751 + 311 255767193 yfiL BSU08310 - COG1131V
## 462 906764..907954 + 396 16077899 yfiM BSU08320 - COG0842V
## 467 911964..912581 - 205 16077904 yfiR BSU08370 - COG1309K
## 474 920474..921475 + 333 16077912 yfiZ BSU08450 - COG0609P
## 481 925633..926427 + 264 16077919 recX BSU08520 - COG2137R
## 487 929406..929738 + 110 16077924 yfhL BSU08580 - COG5658S
## 513 961394..962161 + 255 255767205 ssuB BSU08830 - COG1116P
## 514 962179..963177 + 332 16077949 ssuA BSU08840 - COG0715P
## 515 963174..964004 + 276 16077950 ssuC BSU08850 - COG0600P
## 519 966196..966669 - 157 16077954 ygaO BSU08890 - -
## 523 969162..970097 + 311 16077957 yhbB BSU08920 - -
## 525 970667..971383 + 238 16077959 yhbD BSU08940 - -
## 526 971374..972087 + 237 16077960 yhbE BSU08950 - COG1664M
## 530 976569..977033 + 154 16077964 yhbI BSU08990 - COG1846K
## 531 977069..977734 + 221 16077965 yhbJ BSU09000 - COG1566V
## 532 977775..979373 + 532 16077966 yhcA BSU09010 - COG2814G
## 533 979396..979926 + 176 16077967 yhcB BSU09020 - COG0655R
## 534 979939..980313 + 124 16077968 yhcC BSU09030 - -
## 535 980313..980468 + 51 16077969 yhcD BSU09040 - -
## 536 980473..981234 + 253 16077970 yhcE BSU09050 - -
## 537 981237..981602 + 121 16077971 yhcF BSU09060 - COG1725K
## 538 981604..982302 + 232 16077972 yhcG BSU09070 - COG1131V
## 539 982319..983236 + 305 16077973 yhcH BSU09080 - COG1131V
## 549 991348..995001 + 1217 16077984 yhcR BSU09190 - COG0737F
## 554 997724..998386 + 220 16077989 yhcW BSU09240 - COG0637R
## 556 1000364..1001716 + 450 255767216 yhxA BSU09260 - COG0161H
## 558 1002501..1003325 + 274 16077993 glpF BSU09280 - COG0580G
## 562 1008668..1009807 + 379 16077997 yhcY BSU09320 - COG4585T
## 563 1009804..1010448 + 214 16077998 yhcZ BSU09330 - COG2197TK
## 580 1028233..1028523 - 96 16078015 yhdK BSU09500 - -
## 581 1028511..1029587 - 358 16078016 yhdL BSU09510 - -
## 589 1036953..1037309 - 118 16078025 crcBA BSU09600 - COG0239D
## 590 1037306..1037701 - 131 16078026 yhdV BSU09610 - COG0239D
## 600 1045318..1047075 + 585 16078036 yheI BSU09710 - COG1132V
## 602 1049142..1049762 - 206 16078038 yheG BSU09730 - COG2910R
## 606 1050811..1052172 - 453 255767225 yheD BSU09770 - -
## 613 1059203..1060420 - 405 255767226 yhaU BSU09850 - COG0475P
## 618 1062591..1063487 + 298 255767229 natA BSU09890 - COG4152R
## 620 1064846..1066072 + 408 16078055 yhaO BSU09910 - COG0420L
## 634 1077440..1078183 + 247 16078068 ecsA BSU10040 - COG1131V
## 635 1078176..1079402 + 408 16078069 ecsB BSU10050 - COG4473U
## 639 1082870..1083184 - 104 16078073 yhgB BSU10090 - -
## 643 1087250..1088182 + 310 16078077 hemH BSU10130 - COG0276H
## 649 1095063..1096103 + 346 16078084 yhfE BSU10200 - COG1363G
## 653 1098412..1099146 + 244 16078088 yhfI BSU10240 - COG1234R
## 664 1109388..1110482 - 364 16078099 yhfS BSU10350 - COG0183I
## 665 1110479..1111918 - 479 16078100 yhfT BSU10360 - COG0318IQ
## 674 1119162..1120631 - 489 16078109 yhjB BSU10450 - COG0591ER
## 677 1121550..1122173 + 207 16078112 yhjE BSU10480 - COG0398S
## 682 1126400..1127452 - 350 255767240 ntdC BSU10530 - COG0673R
## 683 1127466..1128314 - 282 255767241 ntdB BSU10540 - COG0561R
## 691 1136320..1139820 + 1166 255767242 addB BSU10620 - COG3857L
## 693 1143577..1144752 + 391 255767244 sbcD BSU10640 - COG0420L
## 694 1144749..1148141 + 1130 255767245 sbcC BSU10650 - COG0419L
## 696 1148494..1148721 - 75 16078131 gerPF BSU10670 - -
## 697 1148744..1149145 - 133 16078132 gerPE BSU10680 - -
## 698 1149145..1149321 - 58 16078133 gerPD BSU10690 - -
## 699 1149318..1149935 - 205 16078134 gerPC BSU10700 - -
## 700 1149958..1150200 - 80 16078135 gerPB BSU10710 - -
## 712 1162267..1163130 + 287 16078146 yisR BSU10830 - COG2207K
## 720 1169877..1170476 - 199 16078155 yisZ BSU10910 - COG0529P
## 723 1172650..1173336 + 228 16078158 yitC BSU10940 - COG2045HR
## 726 1174861..1175976 - 371 16078161 yitF BSU10970 - COG4948MR
## 728 1177365..1178213 - 282 16078163 yitH BSU10990 - COG0456R
## 733 1182448..1183032 - 194 16078168 yitM BSU11040 - -
## 734 1183029..1183958 - 309 255767246 yitO BSU11055 - -
## 736 1184657..1185004 + 115 255767247 yizB BSU11079 - COG1695K
## 737 1185001..1185588 + 195 255767248 yitQ BSU11080 - -
## 747 1192858..1194288 + 476 255767250 yitY BSU11170 - COG0277C
## 749 1195034..1196071 + 345 255767251 argC BSU11190 - COG0002E
## 750 1196091..1197311 + 406 255767252 argJ BSU11200 - COG1364E
## 751 1197326..1198102 + 258 16078186 argB BSU11210 - COG0548E
## 753 1199327..1200388 + 353 255767254 carA BSU11230 - COG0505EF
## 754 1200381..1203473 + 1030 255767255 carB BSU11240 - COG0458EF
## 760 1206629..1207582 + 317 50812218 med BSU11300 - COG1744R
## 763 1208222..1209160 + 312 16078198 fabHA BSU11330 - COG0332I
## 766 1211477..1212463 + 328 16078201 appD BSU11360 - COG0444EP
## 768 1215243..1216193 + 316 255767258 appB BSU11390 - COG0601EP
## 773 1221594..1222529 + 311 16078209 oppB BSU11440 - COG0601EP
## 774 1222533..1223450 + 305 16078210 oppC BSU11450 - COG1173EP
## 775 1223455..1224531 + 358 16078211 oppD BSU11460 - COG0444EP
## 782 1229915..1231036 + 373 16078218 coiA BSU11530 - COG4469R
## 785 1233614..1234513 - 299 255767262 yjbH BSU11550 - COG2761Q
## 789 1236609..1236977 + 122 16078224 yjbL BSU11590 - -
## 790 1237006..1237641 + 211 16078225 yjbM BSU11600 - COG2357S
## 795 1630382..1631083 + 233 16078621 cysH BSU15570 - COG0175EH
## 796 1631095..1632159 + 354 16078622 cysP BSU15580 - COG0306P
## 797 1632208..1633356 + 382 16078623 sat BSU15590 - COG2046P
## 799 1634061..1634834 + 257 16078625 sumT BSU15610 - COG0007H
## 800 1634837..1635622 + 261 16078626 sirB BSU15620 - COG2138S
## 805 1641672..1641941 + 89 18677778 ylzA BSU15670 - COG2052S
## 806 1641949..1642563 + 204 50812226 gmk BSU15680 - COG0194F
## 808 1642851..1644071 + 406 16078633 coaBC BSU15700 - COG0452H
## 809 1644068..1646485 + 805 16078634 priA BSU15710 - COG1198L
## 810 1646512..1646994 + 160 16078635 def BSU15720 - COG0242J
## 811 1646999..1647952 + 317 16078636 fmt BSU15730 - COG0223J
## 812 1647939..1649282 + 447 16078637 rsmB BSU15740 - COG0144J
## 813 1649286..1650377 + 363 16078638 yloN BSU15750 - COG0820R
## 814 1650384..1651148 + 254 16078639 prpC BSU15760 - COG0631T
## 815 1651142..1653088 + 648 16078640 prkC BSU15770 - COG2815S
## 816 1653103..1653999 + 298 16078641 yloQ BSU15780 - COG1162R
## 821 1656064..1656426 + 120 16078646 yloU BSU15830 - COG1302S
## 823 1658242..1658904 + 220 16078648 sdaAB BSU15850 - COG1760E
## 824 1658930..1659832 + 300 16078649 sdaAA BSU15860 - COG1760E
## 826 1661967..1662533 + 188 16078651 ylpC BSU15880 - COG2050Q
## 827 1662547..1663548 + 333 16078652 plsX BSU15890 - COG0416I
## 828 1663567..1664520 + 317 16078653 fabD BSU15900 - COG0331I
## 832 1666560..1670120 + 1186 255767364 smc BSU15940 - COG1196D
## 835 1671828..1672160 + 110 16078660 ylxM BSU15970 - COG2739S
## 837 1673620..1673892 + 90 16078662 rpsP BSU15990 - COG0228J
## 839 1674259..1674645 + 128 16078664 ylqD BSU16010 - -
## 840 1674650..1675174 + 174 16078665 rimM BSU16020 - COG0806J
## 844 1677451..1678218 + 255 16078669 rnhB BSU16060 - COG0164L
## 845 1678250..1679980 + 576 16078670 ylqG BSU16070 - -
## 847 1680431..1681588 + 385 16078672 sucC BSU16090 - COG0045C
## 852 1687187..1688101 + 304 16078677 xerC BSU16140 - COG4974L
## 853 1688114..1688659 + 181 16078678 clpQ BSU16150 - COG5405O
## 854 1688676..1690079 + 467 16078679 hslU BSU16160 - COG1220O
## 856 1691278..1691667 + 129 16078681 flgB BSU16180 - COG1815N
## 857 1691667..1692119 + 150 16078682 flgC BSU16190 - COG1558N
## 858 1692130..1692450 + 106 16078683 fliE BSU16200 - COG1677NU
## 859 1692496..1694106 + 536 16078684 fliF BSU16210 - COG1766NU
## 861 1695254..1695880 + 208 255767365 fliH BSU16230 - COG1317NU
## 862 1695877..1697193 + 438 255767366 fliI BSU16240 - COG1157NU
## 863 1697196..1697639 + 147 16078688 fliJ BSU16250 - COG2882NUO
## 864 1697651..1698265 + 204 255767367 ylxF BSU16260 - COG3334S
## 865 1698278..1699741 + 487 255767368 fliK BSU16270 - COG3144N
## 866 1699738..1700160 + 140 16078691 flgD BSU16280 - COG1843N
## 867 1700182..1700976 + 264 255767369 flgG BSU16290 - COG4786N
## 868 1701016..1701231 + 71 255767370 ylzI BSU16299 - COG1582N
## 869 1701228..1701650 + 140 16078693 fliL BSU16300 - COG1580N
## 870 1701684..1702682 + 332 16078694 fliM BSU16310 - COG1868N
## 871 1702672..1703808 + 378 16078695 fliY BSU16320 - COG1776NT
## 872 1703834..1704196 + 120 16078696 cheY BSU16330 - COG2204T
## 873 1704211..1704870 + 219 16078697 fliZ BSU16340 - COG3190N
## 874 1704863..1705528 + 221 16078698 fliP BSU16350 - COG1338NU
## 875 1705543..1705812 + 89 16078699 fliQ BSU16360 - COG1987NU
## 876 1705820..1706599 + 259 255767371 fliR BSU16370 - COG1684NU
## 877 1706599..1707681 + 360 16078701 flhB BSU16380 - COG1377NU
## 878 1707714..1709747 + 677 255767372 flhA BSU16390 - COG1298NU
## 879 1709747..1710847 + 366 16078703 flhF BSU16400 - COG1419N
## 880 1710838..1711734 + 298 16078704 ylxH BSU16410 - COG0455D
## 881 1711736..1712809 + 357 255767373 cheB BSU16420 - COG2201NT
## 882 1712815..1714833 + 672 255767374 cheA BSU16430 - COG0643NT
## 883 1714855..1715325 + 156 16078707 cheW BSU16440 - COG0835NT
## 884 1715344..1715973 + 209 16078708 cheC BSU16450 - COG1776NT
## 885 1715970..1716470 + 166 16078709 cheD BSU16460 - COG1871NT
## 886 1716493..1717257 + 254 16078710 sigD BSU16470 - COG1191K
## 890 1719802..1720524 + 240 50812227 pyrH BSU16510 - COG0528F
## 892 1721214..1721996 + 260 16078716 uppS BSU16530 - COG0020I
## 894 1722871..1724022 + 383 255767375 dxr BSU16550 - COG0743I
## 895 1724029..1725297 + 422 16078719 rseP BSU16560 - COG0750M
## 898 1731776..1732246 + 156 16078722 ylxS BSU16590 - COG0779S
## 899 1732281..1733396 + 371 16078723 nusA BSU16600 - COG0195K
## 900 1733410..1733685 + 91 16078724 ylxR BSU16610 - COG2740K
## 901 1733687..1733989 + 100 16078725 ylxQ BSU16620 - COG1358J
## 902 1734009..1736159 + 716 16078726 infB BSU16630 - COG0532J
## 903 1736156..1736434 + 92 16078727 ylxP BSU16640 - COG1550S
## 905 1736886..1737815 + 309 16078729 truB BSU16660 - COG0130J
## 909 1741618..1742577 + 319 16078733 ylxY BSU16700 - COG0726G
## 912 1744367..1745260 + 297 16078736 spoVFA BSU16730 - COG0686E
## 915 1747123..1748337 + 404 255767377 dapG BSU16760 - COG0527E
## 918 1751201..1751938 + 245 255767379 tepA BSU16790 - COG0740OU
## 923 1757037..1758317 + 426 255767383 ymfF BSU16845 - COG0612R
## 928 1762623..1763204 + 193 255767387 pgsA BSU16920 - COG0558I
## 935 1770461..1771504 + 347 16078762 tdh BSU16990 - COG1063ER
## 937 1772843..1774372 + 509 16078764 ymcB BSU17010 - COG0621J
## 940 1775745..1778321 + 858 255767391 mutS BSU17040 - COG0249L
## 947 1785133..1786107 + 324 255767392 pksD BSU17110 - COG3321Q
## 949 1788469..1788717 + 82 18677776 acpK BSU17130 - COG0236IQ
## 950 1788695..1789942 + 415 255767394 pksF BSU17140 - COG0304IQ
## 951 1789943..1791205 + 420 50812233 pksG BSU17150 - COG3425I
## 952 1791193..1791972 + 259 16078777 pksH BSU17160 - COG1024I
## 953 1792012..1792761 + 249 255767395 pksI BSU17170 - COG1024I
## 954 1792806..1807937 + 5043 255767396 pksJ BSU17180 - COG3321Q
## 955 1807921..1821537 + 4538 255767397 pksL BSU17190 - COG3321Q
## 957 1834409..1850875 + 5488 255767399 pksN BSU17210 - COG3321Q
## 965 1864691..1865044 - 117 16078792 ebrB BSU17290 - COG2076P
## 969 1866389..1867333 + 314 255767406 miaA BSU17330 - COG0324J
## 973 1868617..1869009 + 130 16078800 nrdI BSU17370 - COG1780F
## 974 1868969..1871071 + 700 16078801 nrdE BSU17380 - COG0209F
## 979 1875304..1876566 + 420 255767409 ynbA BSU17430 - COG2262R
## 990 1884968..1885321 + 117 16078817 ynaF BSU17540 - -
## 994 1887352..1888743 + 463 255767414 xynP BSU17570 - COG2211G
## 1002 1899589..1900050 + 153 255767419 yncE BSU17650 - -
## 1004 2159742..2159984 - 80 16079061 yosR BSU20030 - COG3118O
## 1005 2159981..2161778 - 329 50812253 nrdF BSU20040 - COG0208F
## 1007 2162108..2165614 - 1084 50812254 nrdEB BSU20060 - COG0209F
## 1008 2165577..2165966 - 129 16079066 nrdI BSU20070 - COG1780F
## 1010 2166413..2166613 - 66 16079068 yosK BSU20090 - -
## 1011 2166658..2166852 - 64 16079069 yosJ BSU20100 - -
## 1012 2166873..2167007 - 44 16079070 yosI BSU20110 - -
## 1014 2167570..2167932 - 120 16079072 yosG BSU20130 - -
## 1015 2167975..2168100 - 41 16079073 yosF BSU20140 - -
## 1016 2168114..2168461 - 115 16079074 yosE BSU20150 - -
## 1017 2168476..2168871 - 131 16079075 yosD BSU20160 - -
## 1018 2168910..2169452 - 180 16079076 yosC BSU20170 - -
## 1022 2170309..2170491 - 60 16079080 yorY BSU20210 - -
## 1023 2170504..2170731 - 75 16079081 yorX BSU20220 - -
## 1024 2170771..2171136 - 121 16079082 yorW BSU20230 - -
## 1025 2171139..2171357 - 72 16079083 yorV BSU20240 - -
## 1026 2171401..2172732 - 443 16079084 mtbP BSU20250 - COG0270L
## 1027 2172781..2172900 - 39 16079085 yorT BSU20260 - -
## 1028 2172932..2173450 - 172 16079086 yorS BSU20270 - COG4502S
## 1029 2173459..2173956 - 165 16079087 yorR BSU20280 - COG0125F
## 1030 2173956..2174111 - 51 16079088 yorQ BSU20290 - -
## 1031 2174104..2174319 - 71 16079089 yorP BSU20300 - -
## 1032 2174352..2174549 - 65 16079090 yorO BSU20310 - -
## 1034 2174852..2175568 - 238 16079092 yorM BSU20330 - COG3584S
## 1035 2175596..2179513 - 1305 16079093 yorL BSU20340 - COG0587L
## 1036 2179526..2181256 - 576 16079094 yorK BSU20350 - COG0608L
## 1037 2181256..2182392 - 378 16079095 yorJ BSU20360 - COG0358L
## 1038 2182408..2183922 - 504 16079096 yorI BSU20370 - COG0305L
## 1039 2183937..2184407 - 156 16079097 yorH BSU20380 - -
## 1041 2185504..2186418 - 304 16079099 yorF BSU20400 - -
## 1046 2188204..2189964 - 586 16079104 yorA BSU20450 - COG3420P
## 1054 2194053..2194400 - 115 16079112 yoqS BSU20530 - -
## 1055 2194402..2194758 - 118 16079113 yoqR BSU20540 - -
## 1060 2196389..2197081 - 230 16079118 yoqL BSU20590 - -
## 1061 2197121..2197324 - 67 16079119 yoqK BSU20600 - -
## 1063 2198070..2198264 - 64 16079121 yoqI BSU20620 - -
## 1065 2198848..2199105 - 85 16079123 yoqG BSU20640 - -
## 1066 2199150..2199353 - 67 16079124 yoqF BSU20650 - -
## 1068 2199580..2200335 - 251 16079126 yoqD BSU20670 - COG3646S
## 1069 2200376..2200783 - 135 16079127 yoqC BSU20680 - -
## 1070 2200790..2201128 - 112 16079128 yoqB BSU20690 - -
## 1071 2201125..2201475 - 116 16079129 yoqA BSU20700 - -
## 1072 2201488..2201691 - 67 16079130 yopZ BSU20710 - -
## 1073 2201705..2201983 - 92 16079131 yopY BSU20720 - -
## 1074 2201980..2202384 - 134 16079132 yopX BSU20730 - -
## 1080 2204192..2205169 - 325 255767466 yopR BSU20790 - -
## 1082 2206682..2207758 - 358 16079140 yopP BSU20810 - COG4974L
## 1083 2207748..2207960 - 70 16079141 yopO BSU20820 - -
## 1084 2208008..2208325 - 105 16079142 yopN BSU20830 - -
## 1086 2208855..2208980 - 41 16079144 yopL BSU20850 - -
## 1088 2210331..2210747 - 138 16079146 yopJ BSU20870 - -
## 1089 2210749..2211282 - 177 16079147 yopI BSU20880 - -
## 1090 2211309..2211845 - 178 16079148 yopH BSU20890 - -
## 1091 2211884..2212015 - 43 16079149 yopG BSU20900 - -
## 1092 2212026..2212241 - 71 16079150 yopF BSU20910 - -
## 1102 2219281..2219469 - 62 16079158 yonU BSU20990 - -
## 1103 2219514..2219765 - 83 255767469 yoyJ BSU20999 - -
## 1107 2222340..2222534 + 64 16079162 yonP BSU21030 - -
## 1110 2227297..2227488 + 63 16079165 yonK BSU21060 - -
## 1114 2229988..2230908 + 306 16079169 yonG BSU21100 - -
## 1115 2230895..2232664 + 589 16079170 yonF BSU21110 - -
## 1116 2232682..2234202 + 506 16079171 yonE BSU21120 - -
## 1117 2234233..2235669 + 478 16079172 yonD BSU21130 - COG4942D
## 1118 2235694..2236230 + 178 16079173 yonC BSU21140 - COG5271R
## 1119 2236269..2237285 + 338 16079174 yonB BSU21150 - -
## 1120 2237321..2237791 + 156 16079175 yonA BSU21160 - -
## 1121 2237806..2238201 + 131 16079176 yomZ BSU21170 - -
## 1122 2238198..2238452 + 84 16079177 yomY BSU21180 - -
## 1123 2238436..2239086 + 216 16079178 yomX BSU21190 - -
## 1124 2239083..2239589 + 168 16079179 yomW BSU21200 - -
## 1125 2239586..2240296 + 236 16079180 yomV BSU21210 - -
## 1126 2240339..2241136 + 265 16079181 yomU BSU21220 - -
## 1127 2241154..2241765 + 203 255767471 youA BSU21229 - -
## 1129 2242056..2242412 + 118 16079183 yomS BSU21240 - -
## 1130 2242414..2243631 + 405 16079184 yomR BSU21250 - -
## 1131 2243642..2243992 + 116 16079185 yomQ BSU21260 - -
## 1133 2244230..2244730 + 166 16079187 yomO BSU21280 - -
## 1134 2244714..2245133 + 139 16079188 yomN BSU21290 - -
## 1137 2246656..2247342 - 228 16079191 yomL BSU21320 - -
## 1142 2256062..2256820 + 252 16079195 yomH BSU21360 - COG4722S
## 1143 2256832..2259459 + 875 16079196 yomG BSU21370 - COG1196D
## 1144 2259475..2260296 + 273 16079197 yomF BSU21380 - -
## 1148 2264680..2264892 + 70 16079201 bhlA BSU21420 - -
## 1150 2265225..2265671 - 148 16079203 bdbB BSU21440 - COG1495O
## 1151 2265668..2266936 - 422 16079204 yolJ BSU21450 - COG0463M
## 1152 2266936..2267349 - 137 16079205 bdbA BSU21460 - COG3118O
## 1156 2270407..2271657 - 416 255767474 uvrX BSU21500 - COG0389L
## 1159 2272534..2272890 - 118 16079212 yolB BSU21530 - -
## 1161 2273989..2274522 - 177 16079214 yokL BSU21550 - COG1670J
## 1163 2275200..2275697 - 165 16079216 yokJ BSU21570 - -
## 1167 2279977..2280867 + 296 16079220 yokF BSU21610 - COG1525L
## 1173 2287097..2287528 - 143 16079227 yppQ BSU21680 - COG0229O
## 1177 2290078..2290272 - 64 16079231 ypmT BSU21720 - -
## 1178 2290285..2290848 - 187 16079232 ypmS BSU21730 - COG4698S
## 1183 2294286..2295281 + 331 16079237 yplP BSU21780 - COG1221KT
## 1185 2295982..2296602 - 206 255767477 ypkP BSU21800 - -
## 1186 2296603..2297109 - 168 16079240 dfrA BSU21810 - COG0262H
## 1188 2297984..2298517 - 177 16079242 ypjQ BSU21830 - COG1267I
## 1190 2299406..2300179 - 257 255767478 ypiP BSU21850 - COG2521R
## 1194 2303920..2304537 - 205 16079248 ypgQ BSU21890 - COG1418R
## 1201 2308792..2308974 - 60 16079255 ypeQ BSU21960 - -
## 1203 2309730..2310419 + 229 16079257 ypdP BSU21980 - COG1738S
## 1204 2310419..2310817 + 132 16079258 ypdQ BSU21990 - COG0328L
## 1210 2316446..2316952 - 168 16079262 ypbQ BSU22040 - COG1755S
## 1212 2318127..2319443 - 438 16079264 pbuX BSU22060 - COG2233F
## 1215 2321972..2322964 - 330 16079267 kdgT BSU22090 - -
## 1216 2323009..2323599 - 196 16079268 kdgA BSU22100 - COG0800G
## 1217 2323601..2324575 - 324 16079269 kdgK BSU22110 - COG0524G
## 1219 2325854..2326681 + 275 16079271 kduI BSU22130 - COG3717G
## 1226 2332153..2332782 - 209 255767483 ypsA BSU22190 - COG4474S
## 1228 2333324..2334565 - 413 16079279 yprB BSU22210 - COG3359L
## 1234 2338809..2339180 - 123 16079285 yppE BSU22270 - -
## 1238 2340802..2341422 + 206 16079288 recU BSU22310 - COG3331R
## 1240 2344264..2344758 - 164 16079290 ypoC BSU22330 - -
## 1241 2344755..2345414 - 219 16079291 nth BSU22340 - COG0177L
## 1244 2347660..2348841 - 393 16079294 aspB BSU22370 - COG0436E
## 1245 2348864..2349349 - 161 16079295 ypmB BSU22380 - COG5353S
## 1248 2352592..2352975 - 127 16079298 panD BSU22410 - COG0853H
## 1249 2352977..2353837 - 286 16079299 panC BSU22420 - COG0414H
## 1251 2354918..2355895 - 325 16079301 birA BSU22440 - COG0340H
## 1252 2355880..2357073 - 397 16079302 cca BSU22450 - COG0617J
## 1253 2357078..2358211 - 377 16079303 ypjH BSU22460 - COG0438M
## 1254 2358208..2358918 - 236 255767484 ypjG BSU22470 - COG2120S
## 1255 2358911..2359324 - 137 16079305 mgsA BSU22480 - COG1803G
## 1256 2359340..2360143 - 267 16079306 dapB BSU22490 - COG0289E
## 1261 2363111..2363878 - 255 16079311 qcrC BSU22540 - COG1290C
## 1262 2363913..2364587 - 224 16079312 qcrB BSU22550 - COG1290C
## 1267 2367954..2369240 - 428 16079317 aroE BSU22600 - COG0128E
## 1268 2369251..2370366 - 371 16079318 tyrA BSU22610 - COG0287E
## 1269 2370415..2371497 - 360 255767486 hisC BSU22620 - COG0079E
## 1270 2371508..2372311 - 267 16079320 trpA BSU22630 - COG0159E
## 1271 2372304..2373506 - 400 50812257 trpB BSU22640 - COG0133E
## 1278 2792218..2792853 - 211 16079787 udk BSU27330 - COG0572F
## 1279 2792860..2794128 - 422 16079788 yrrO BSU27340 - COG0826O
## 1280 2794147..2795076 - 309 16079789 yrrN BSU27350 - COG0826O
## 1283 2797100..2797381 - 93 16079792 yrzB BSU27380 - COG3906S
## 1284 2797399..2797815 - 138 16079793 yrrK BSU27390 - COG0816L
## 1288 2802358..2803086 + 242 16079796 glnQ BSU27430 - COG1126E
## 1290 2803990..2804640 + 216 16079798 glnM BSU27450 - COG0765E
## 1292 2805348..2805479 - 43 255767626 yrzQ BSU27468 - -
## 1293 2805501..2805692 - 63 255767627 yrzR BSU27469 - -
## 1295 2806286..2808682 - 798 16079801 yrrC BSU27480 - COG0507L
## 1297 2809413..2810528 - 371 255767628 mnmA BSU27500 - COG0482J
## 1298 2810559..2811698 - 379 50812274 iscS BSU27510 - COG1104E
## 1302 2814743..2816521 - 592 16079809 aspS BSU27550 - COG0173J
## 1308 2822901..2823413 - 170 16079815 apt BSU27610 - COG0503F
## 1312 2826900..2829113 - 737 16081162 secDF BSU27650 - COG0342U
## 1317 2832424..2832690 - 88 255767632 yajC BSU27700 - COG1862U
## 1318 2832727..2833872 - 381 16079824 tgt BSU27710 - COG0343J
## 1319 2833899..2834927 - 342 16079825 queA BSU27720 - COG0809J
## 1320 2834957..2835157 - 66 255767633 yrzS BSU27729 - -
## 1321 2835150..2836154 - 334 50812277 ruvB BSU27730 - COG2255L
## 1323 2836909..2837421 - 170 16079827 bofC BSU27750 - -
## 1327 2841169..2841300 + 43 16079832 yrzH BSU27800 - -
## 1333 2845955..2847061 - 368 16079837 nadA BSU27850 - COG0379H
## 1334 2847048..2847917 - 289 16079838 nadC BSU27860 - COG0157H
## 1336 2849569..2850756 + 395 16079840 nifS BSU27880 - COG1104E
## 1338 2851283..2852140 - 285 16079842 pheA BSU27900 - COG0077E
## 1340 2852661..2853947 - 428 16079844 obgE BSU27920 - COG0536R
## 1342 2854880..2855164 - 94 16079846 rpmA BSU27940 - COG0211J
## 1343 2855177..2855515 - 112 255767640 ysxB BSU27950 - COG2868J
## 1345 2855973..2856839 - 288 16079849 spoIVFB BSU27970 - COG1994R
## 1347 2857776..2858582 - 268 16079851 minD BSU27990 - COG2894D
## 1349 2859317..2859835 - 172 16079853 mreD BSU28010 - COG2891M
## 1350 2859832..2860704 - 290 255767641 mreC BSU28020 - COG1792M
## 1352 2861840..2862535 - 231 16079856 radC BSU28040 - COG2003L
## 1359 2869964..2870989 - 341 16079862 ysxE BSU28100 - COG3173R
## 1361 2872880..2874172 - 430 16079864 hemL BSU28120 - COG0001H
## 1362 2874202..2875176 - 324 16079865 hemB BSU28130 - COG0113H
## 1363 2875173..2875961 - 262 16079866 hemD BSU28140 - COG1587H
## 1364 2875951..2876895 - 314 16079867 hemC BSU28150 - COG0181H
## 1365 2876928..2877758 - 276 255767646 hemX BSU28160 - COG0755O
## 1368 2879882..2880469 - 195 16079871 engB BSU28190 - COG0218R
## 1374 2888940..2889539 - 199 16079877 leuD BSU28250 - COG0066E
## 1376 2891020..2892117 - 365 255767650 leuB BSU28270 - COG0473CE
## 1377 2892138..2893694 - 518 16079880 leuA BSU28280 - COG0119E
## 1378 2893681..2894709 - 342 16079881 ilvC BSU28290 - COG0059EH
## 1379 2894733..2895251 - 172 255767651 ilvH BSU28300 - COG0440E
## 1384 2900020..2900529 - 169 255767653 ysnB BSU28350 - COG0622R
## 1385 2900545..2901141 - 198 16079888 ysnA BSU28360 - COG0127F
## 1388 2903217..2904035 - 272 255767654 racE BSU28390 - COG0796M
## 1392 2905571..2906332 - 253 16079895 sdhB BSU28430 - COG0479C
## 1393 2906335..2908095 - 586 255767656 sdhA BSU28440 - COG1053C
## 1400 2915365..2916342 - 325 16079904 etfA BSU28520 - COG2025C
## 1401 2916378..2917151 - 257 16079905 etfB BSU28530 - COG2086C
## 1402 2917166..2917942 - 258 16079906 ysiB BSU28540 - COG1024I
## 1405 2920517..2920921 - 134 16079909 yshE BSU28570 - COG3766S
## 1406 2920936..2923293 - 785 16079910 mutSB BSU28580 - COG1193L
## 1408 2925100..2925633 - 177 16079912 yshB BSU28600 - COG1286R
## 1411 2927008..2929422 - 804 16079915 pheT BSU28630 - COG0072J
## 1416 2933185..2934597 + 470 16079920 glcD BSU28680 - COG0277C
## 1420 2938330..2939832 - 500 255767661 abfA BSU28720 - COG3534G
## 1421 2939851..2940696 - 281 255767662 araQ BSU28730 - COG0395G
## 1422 2940697..2941638 - 313 16079926 araP BSU28740 - COG1175G
## 1423 2941674..2942975 - 433 255767663 araN BSU28750 - COG1653G
## 1424 2943006..2944190 - 394 16079928 araM BSU28760 - COG0371C
## 1425 2944187..2945005 - 272 16079929 araL BSU28770 - COG0647G
## 1426 2944983..2945672 - 229 16079930 araD BSU28780 - COG0235G
## 1427 2945689..2947371 - 560 16079931 araB BSU28790 - COG1069C
## 1433 2952224..2952583 - 119 16079937 rplT BSU28850 - COG0292J
## 1434 2952615..2952815 - 66 16079938 rpmI BSU28860 - COG0291J
## 1437 2954492..2955187 - 231 16079942 ysbB BSU28900 - COG1346M
## 1439 2955783..2956508 - 241 16079944 lytT BSU28920 - COG3279KT
## 1444 2962510..2963151 - 213 16079949 ytxB BSU28970 - COG0398S
## 1445 2963185..2964120 - 311 16079950 dnaI BSU28980 - COG1484L
## 1451 2968824..2970014 + 396 16079956 ytbD BSU29040 - COG2814G
## 1453 2970922..2971515 - 197 16079958 coaE BSU29060 - COG0237H
## 1455 2972329..2973159 - 276 255767671 mutM BSU29080 - COG0266L
## 1457 2976068..2977807 - 579 16079962 phoR BSU29100 - COG5002T
## 1459 2978734..2979672 - 312 16079964 mdh BSU29120 - COG0039C
## 1465 2984788..2986545 - 585 16079970 pyk BSU29180 - COG0469G
## 1467 2987731..2988708 - 325 16079972 accA BSU29200 - COG0825I
## 1471 2994756..2995097 + 113 255767674 ytrH BSU29239 - -
## 1477 2998796..2999698 - 300 16079980 ytnM BSU29280 - COG0730R
## 1478 2999717..3000967 - 416 16079981 ytnL BSU29290 - COG1473R
## 1479 3000985..3001677 - 230 16079982 rbfK BSU29300 - COG0196H
## 1480 3001724..3003052 - 442 16079983 ytnJ BSU29310 - COG2141C
## 1481 3003049..3003330 - 93 16079984 ytnI BSU29320 - COG0695O
## 1482 3003345..3004349 - 334 16079985 ytmO BSU29330 - COG2141C
## 1483 3004346..3005125 - 259 16079986 tcyN BSU29340 - COG1126E
## 1484 3005122..3005829 - 235 16079987 tcyM BSU29350 - COG0765E
## 1485 3005859..3006578 - 239 16079988 tcyL BSU29360 - COG0765E
## 1486 3006600..3007412 - 270 16079989 tcyK BSU29370 - COG0834ET
## 1487 3007426..3008235 - 269 16079990 tcyJ BSU29380 - COG0834ET
## 1493 3011751..3013136 - 461 16079996 argH BSU29440 - COG0165E
## 1499 3018309..3018764 - 151 16080002 ytfJ BSU29500 - COG3874S
## 1501 3019533..3020027 - 164 16080004 yteJ BSU29520 - COG1714S
## 1504 3022068..3023657 - 529 16080007 ytcJ BSU29550 - COG1574R
## 1507 3025748..3026953 - 401 255767679 ytbJ BSU29580 - COG0301H
## 1517 3038060..3038203 - 47 255767681 ytzK BSU29679 - -
## 1519 3040092..3040724 + 210 16080021 acuA BSU29690 - -
## 1520 3040751..3041395 + 214 16080022 acuB BSU29700 - COG3448T
## 1522 3042566..3043294 - 242 16080024 ytxE BSU29720 - COG1360N
## 1526 3046757..3047083 - 108 16080028 ytxJ BSU29760 - -
## 1527 3047107..3047562 - 151 255767682 ytxH BSU29770 - COG4980R
## 1531 3052743..3053348 - 201 16080034 ytpR BSU29820 - COG0073R
## 1532 3053364..3054173 - 269 16080035 ytpQ BSU29830 - COG4848S
## 1542 3061651..3063807 - 718 255767686 amyX BSU29930 - COG1523G
## 1543 3063833..3064762 - 309 16080046 ytlR BSU29940 - COG1597IR
## 1544 3064811..3065725 - 304 16080047 ytlQ BSU29950 - -
## 1549 3070246..3071403 - 385 16080052 ythQ BSU30000 - COG4473U
## 1557 3078643..3079311 - 222 16080061 yteU BSU30090 - COG5578S
## 1558 3079333..3080619 - 428 16080062 yteT BSU30100 - COG0673R
## 1559 3080631..3081134 - 167 255767689 yteS BSU30110 - -
## 1560 3081131..3082243 - 370 255767690 yteR BSU30120 - COG4225R
## 1563 3085800..3087296 - 498 255767692 ytcQ BSU30160 - COG1653G
## 1567 3090482..3091489 - 335 16080072 bioB BSU30200 - COG0502H
## 1568 3091492..3092187 - 231 16080073 bioD BSU30210 - COG0132H
## 1569 3092184..3093353 - 389 16080074 bioF BSU30220 - COG0156H
## 1570 3093343..3094689 - 448 16080075 bioA BSU30230 - COG0161H
## 1573 3096782..3097816 + 344 16080078 msmR BSU30260 - COG1609K
## 1574 3097850..3099130 + 426 16080079 msmE BSU30270 - COG1653G
## 1575 3099123..3100034 + 303 16080080 amyD BSU30280 - COG1175G
## 1576 3100031..3100861 + 276 16080081 amyC BSU30290 - COG0395G
## 1584 3109397..3111337 - 646 16080089 bceB BSU30370 - COG4591M
## 1586 3112190..3113194 - 334 16080091 bceS BSU30390 - COG0642T
## 1588 3113979..3115289 - 436 16080093 ytrF BSU30410 - COG4591M
## 1589 3115279..3115974 - 231 16080094 ytrE BSU30420 - COG1136V
## 1590 3115989..3116966 - 325 16080095 ytrD BSU30430 - -
## 1591 3116996..3117982 - 328 16080096 ytrC BSU30440 - -
## 1592 3117976..3118854 - 292 16080097 ytrB BSU30450 - COG1131V
## 1595 3119999..3120967 + 322 16080100 ytqA BSU30480 - COG1242R
## 1597 3121538..3122641 - 367 16080102 ytpB BSU30500 - -
## 1606 3132370..3133374 + 334 255767699 ytlA BSU30595 - COG0715P
## 1607 3133387..3134169 + 260 16080113 ytlC BSU30610 - COG1116P
## 1618 3139431..3140762 + 443 255767701 ythA BSU30710 - COG1271C
## 1621 3142077..3142964 - 295 16080126 mntD BSU30740 - COG1108P
## 1622 3142954..3144261 - 435 16080127 mntC BSU30750 - COG1108P
## 1623 3144267..3145019 - 250 16080128 mntB BSU30760 - COG1121P
## 1625 3146238..3147353 - 371 16080130 menC BSU30780 - COG4948MR
## 1627 3148901..3149716 - 271 16080132 menB BSU30800 - COG0447H
## 1628 3149751..3150575 - 274 16080133 ytxM BSU30810 - COG0596R
## 1629 3150563..3152305 - 580 16080134 menD BSU30820 - COG1165H
## 1633 3155725..3157011 + 428 16080138 ytcA BSU30860 - COG1004M
## 1634 3157008..3157958 + 316 16080139 ytcB BSU30870 - COG0451MG
## 1636 3159258..3159689 - 143 16080141 ytxO BSU30890 - -
## 1637 3159691..3160746 - 351 16080142 cotS BSU30900 - COG2334R
## 1641 3163735..3166131 - 798 16080146 glgP BSU30940 - COG0058G
## 1642 3166118..3167572 - 484 16080147 glgA BSU30950 - COG0297G
## 1643 3167569..3168600 - 343 16080148 glgD BSU30960 - COG0448G
## 1644 3168624..3169766 - 380 16080149 glgC BSU30970 - COG0448G
## 1647 3179926..3180447 - 173 16080152 yuaI BSU31000 - COG1247M
## 1648 3180465..3181994 - 509 16080153 yuaG BSU31010 - COG2268S
## 1652 3183867..3185075 - 402 255767703 gbsB BSU31050 - COG1454C
## 1656 3188414..3189082 + 222 16080161 ktrA BSU31090 - COG0569P
## 1665 3197933..3199207 - 424 16080170 yulE BSU31180 - COG4806G
## 1666 3199233..3199547 - 104 16080171 yulD BSU31190 - COG3254S
## 1667 3199565..3201022 - 485 16080172 yulC BSU31200 - COG1070G
## 1678 3216163..3217452 - 429 255767709 yugS BSU31300 - COG1253R
## 1679 3217496..3218173 - 225 16080183 yugP BSU31310 - COG2738R
## 1681 3218525..3218857 + 110 255767711 mstX BSU31321 - -
## 1690 3225772..3226932 - 386 50812284 alaT BSU31400 - COG0436E
## 1695 3230067..3231353 + 428 255767715 kinB BSU31450 - COG0642T
## 1699 3233911..3235785 + 624 255767716 pbpD BSU31490 - COG0744M
## 1702 3237157..3238758 + 533 16080204 yufL BSU31520 - COG3290T
## 1705 3241085..3242617 + 510 16080207 yufO BSU31550 - COG3845R
## 1706 3242610..3243656 + 348 16080208 yufP BSU31560 - COG4603R
## 1710 3246598..3249003 + 801 161511068 mrpA BSU31600 - COG1009CP
## 1711 3248996..3249427 + 143 16080213 mrpB BSU31610 - COG2111P
## 1712 3249427..3249768 + 113 255767719 mrpC BSU31620 - COG1006P
## 1713 3249761..3251242 + 493 255767720 mrpD BSU31630 - COG0651CP
## 1714 3251248..3251724 + 158 255767721 mrpE BSU31640 - COG1863P
## 1715 3251724..3252008 + 94 255767722 mrpF BSU31650 - COG2212P
## 1717 3252405..3252785 - 126 255767723 yuxO BSU31670 - COG2050Q
## 1719 3253529..3255838 - 769 255767724 comP BSU31690 - COG4585T
## 1720 3255853..3256020 - 55 16080221 comX BSU31700 - -
## 1725 3259403..3260875 - 490 16080226 yueK BSU31750 - COG1488H
## 1735 3266200..3266655 - 151 16080236 yueC BSU31850 - -
## 1736 3266687..3269917 - 1076 16080237 yueB BSU31860 - COG1511S
## 1738 3274462..3275817 - 451 16080240 yukC BSU31890 - COG4499S
## 1744 3280294..3280503 - 69 255767731 ybdZ BSU31959 - COG3251S
## 1745 3280519..3287655 - 2378 255767732 dhbF BSU31960 - COG1020Q
## 1746 3287675..3288613 - 312 16080250 dhbB BSU31970 - COG1535Q
## 1747 3288641..3290260 - 539 16080251 dhbE BSU31980 - COG1021Q
## 1748 3290289..3291485 - 398 255767733 dhbC BSU31990 - COG1169HQ
## Product
## 3 RNA binding protein
## 4 recombination protein F
## 10 hypothetical protein
## 12 methyltransferase
## 13 GIY-YIG nuclease superfamily protein
## 19 ribonuclease M5
## 25 pur operon repressor
## 28 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase
## 35 exporter
## 36 fusion methylase and nucleotide pyrophosphohydrolase
## 38 spore protein
## 39 membrane protein of the forespore
## 43 hypothetical protein
## 45 tRNAile lysidine synthetase
## 48 pantothenate kinase
## 49 heat shock protein 33
## 52 4-amino-4-deoxychorismate synthase
## 53 para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II
## 54 4-amino-4-deoxychorismate lyase
## 55 dihydropteroate synthase
## 56 dihydroneopterin aldolase
## 57 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
## 58 transcriptional regulator
## 61 transcriptional regulator
## 62 activator of protein kinase McsB
## 63 ATP:guanido phosphotransferase
## 65 DNA repair protein RadA
## 67 hypothetical protein
## 68 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
## 71 serine acetyltransferase
## 72 cysteinyl-tRNA synthetase
## 73 ribonuclease for 23S RNA maturation
## 74 23S rRNA methyltransferase
## 77 50S ribosomal protein L33
## 82 50S ribosomal protein L10
## 89 antitoxin MazF
## 91 piezosome protein
## 92 antagonist of RsbT
## 93 switch protein/serine-threonine kinase
## 95 anti-anti-sigma factor
## 96 serine-protein kinase RsbW
## 97 RNA polymerase sigma factor SigB
## 99 hypothetical protein
## 100 hypothetical protein
## 104 phage integrase
## 105 immunity anti-repressor
## 107 transcriptional regulator
## 110 hypothetical protein
## 111 DNA wielding protein
## 113 hypothetical protein
## 114 hypothetical protein
## 115 hypothetical protein
## 116 hypothetical protein
## 117 hypothetical protein
## 118 hypothetical protein
## 119 hypothetical protein
## 120 hypothetical protein
## 121 hypothetical protein
## 122 cell wall hydrolase
## 126 response regulator aspartate phosphatase
## 135 hypothetical protein
## 161 ArsR family transcriptional regulator
## 169 hypothetical protein
## 171 two-component sensor histidine kinase YdfI
## 178 oxidoreductase
## 186 spore coat protein
## 187 hypothetical protein
## 189 transcriptional regulator
## 195 MarR family transcriptional regulator
## 197 dehydrogenase
## 207 hypothetical protein
## 212 PTS system oligo-alpha-mannoside transporter subunit IIB
## 213 PTS system oligo-alpha-mannoside transporter subunit IIA
## 214 PTS system oligo-alpha-mannoside transporter subunit IIC
## 216 GntR family transcriptional regulator
## 217 carbohydrate kinase
## 218 phosphohexomutase
## 220 thiamine monophosphate kinase
## 221 hypothetical protein
## 222 hypothetical protein
## 223 ribosomal protein S18 alanine N-acetyltransferase
## 226 molybdenum cofactor biosynthesis protein MoaC
## 227 redox-sensing transcriptional repressor Rex
## 228 twin-arginine pre-protein translocation pathway protein
## 230 hypothetical protein
## 232 co-chaperonin GroES
## 236 DNA-methyltransferase
## 238 BsuM restriction component
## 239 DNA restriction enzyme component
## 248 phage replication protein
## 249 hypothetical protein
## 258 peroxydase
## 261 gamma-aminobutyrate permease
## 264 hypothetical protein
## 265 hypothetical protein
## 271 hypothetical protein
## 273 phosphoribosylaminoimidazole carboxylase I
## 274 phosphoribosylaminoimidazole carboxylase ATPase subunit
## 276 phosphoribosylaminoimidazolesuccinocarboxamide synthase
## 277 phosphoribosylformylglycinamidine synthase subunit PurS
## 278 phosphoribosylformylglycinamidine synthase I
## 279 phosphoribosylformylglycinamidine synthase II
## 281 phosphoribosylaminoimidazole synthetase
## 282 phosphoribosylglycinamide formyltransferase
## 283 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
## 288 amidohydrolase
## 289 lipoprotein
## 293 ATP-dependent DNA helicase
## 294 NAD-dependent DNA ligase LigA
## 299 aspartyl/glutamyl-tRNA amidotransferase subunit C
## 300 aspartyl/glutamyl-tRNA amidotransferase subunit A
## 308 restriction type II methylase
## 313 hypothetical protein
## 316 response regulator aspartate phosphatase
## 321 hypothetical protein
## 323 inner spore coat protein
## 324 inner spore coat protein
## 326 acetyltransferase
## 328 permease
## 329 two-component sensor histidine kinase YesN
## 331 pectin degradation byproducts-binding lipoprotein
## 332 rhamnogalacturonan permease
## 333 rhamnogalacturonan permease
## 334 rhamnogalacturonan hydrolase
## 335 AraC family transcriptional regulator
## 336 rhamnogalacturonan acetylesterase
## 337 hypothetical protein
## 339 polysaccharide lyase; lipoprotein
## 341 rhamnogalacturonan acetylesterase
## 342 beta-galacturonidase
## 345 ABC transporter permease
## 346 ABC transporter permease
## 352 hypothetical protein
## 360 CDP-sugar-dehydratase/epimerase
## 361 glycosyltransferase
## 362 glycosyltransferase
## 367 aldehyde dehydrogenase
## 380 iron-dicitrate ABC transporter ATP-binding protein
## 381 iron-dicitrate ABC transporter permease
## 385 hypothetical protein
## 389 two-component sensor histidine kinase
## 390 two-component response regulator
## 403 hypothetical protein
## 406 spore germination integral inner membrane protein
## 407 hypothetical protein
## 408 spore germination protein
## 411 trehalose-6-phosphate hydrolase
## 418 protein-tyrosine-phosphatase
## 419 hypothetical protein
## 424 mechanosensitive ion channel protein MscS
## 434 hypothetical protein
## 436 acetoin dehydrogenase E1 component subunit alpha
## 437 acetoin dehydrogenase E1 component subunit beta
## 438 branched-chain alpha-keto acid dehydrogenase E2 subunit
## 444 hypothetical protein
## 445 hypothetical protein
## 446 hypothetical protein
## 449 Mal operon transcriptional activator
## 451 maltose and maltodextrin ABC transporter subunit ATP-binding protein
## 453 catechol-2,3-dioxygenase membrane subunit
## 456 sugar transporter
## 457 sugar-phosphate epimerase/isomerase
## 459 two-component sensor histidine kinase YfiK
## 461 ABC transporter ATP-binding protein
## 462 ABC transporter permease
## 467 TetR/AcrR family transcriptional regulator
## 474 iron(III) siderophore transport permease
## 481 recombination regulator RecX
## 487 SdpC immunity factor
## 513 aliphatic sulfonate ABC transporter ATP-binding protein
## 514 aliphatic sulfonate ABC transporter binding lipoprotein
## 515 aliphatic sulfonate ABC transporter permease
## 519 hypothetical protein
## 523 hypothetical protein
## 525 nucleic acid binding protein
## 526 hypothetical protein
## 530 MarR family transcriptional regulator
## 531 hypothetical protein
## 532 exporter
## 533 oxidoreductase
## 534 hypothetical protein
## 535 hypothetical protein
## 536 hypothetical protein
## 537 GntR family transcriptional regulator
## 538 ABC transporter ATP-binding protein
## 539 ABC transporter ATP-binding protein
## 549 non specific extracellular endonuclease cleaving RNA and DNA
## 554 phosphoglycolate phosphatase
## 556 aminotransferase
## 558 glycerol permease
## 562 two-component sensor histidine kinase YhcZ
## 563 two-component response regulator YhcY
## 580 negative regulator of the activity of sigma-M
## 581 negative regulator of the activity of sigma-M
## 589 camphor resistance protein CrcB
## 590 integral membrane protein
## 600 ABC transporter ATP-binding protein
## 602 NADH-flavin oxidoreductase
## 606 spore coat associated protein
## 613 K+ efflux transporter
## 618 Na+-efflux ABC transporter ATP-binding protein
## 620 exonuclease
## 634 ABC transporter ATP-binding protein
## 635 ABC transporter membrane protein
## 639 hypothetical protein
## 643 ferrochelatase
## 649 endoglucanase
## 653 metal-dependent hydrolase
## 664 acetyl-CoA acetyltransferase
## 665 acyl-CoA synthetase
## 674 Na+/metabolite cotransporter
## 677 hypothetical protein
## 682 neotrehalosadiamine biosynthesis dehydrogenase
## 683 neotrehalosadiamine biosynthesis hydrolase
## 691 ATP-dependent deoxyribonuclease subunit B
## 693 DNA repair exonuclease
## 694 DNA ATP-dependent repair enzyme
## 696 spore germination protein
## 697 spore germination protein
## 698 spore germination protein
## 699 spore germination protein
## 700 spore germination protein
## 712 AraC family transcriptional regulator
## 720 adenylylsulfate kinase
## 723 2-phosphosulfolactate phosphatase
## 726 enolase
## 728 N-acetyltransferase
## 733 hypothetical protein
## 734 hypothetical protein
## 736 DNA/RNA binding protein
## 737 hypothetical protein
## 747 FMN/FAD-binding oxidoreductase
## 749 N-acetyl-gamma-glutamyl-phosphate reductase
## 750 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase
## 751 acetylglutamate kinase
## 753 carbamoyl phosphate synthase small subunit
## 754 carbamoyl phosphate synthase large subunit
## 760 positive regulator of comK
## 763 3-oxoacyl-ACP synthase
## 766 oligopeptide ABC transporter ATP-binding protein
## 768 oligopeptide ABC transporter permease
## 773 oligopeptide ABC transporter permease
## 774 oligopeptide ABC transporter permease
## 775 oligopeptide ABC transporter ATP-binding protein
## 782 DNA transport protein
## 785 thiol management oxidoreductase component
## 789 phosphatase
## 790 (p)ppGpp synthetase
## 795 (phospho)adenosine phosphosulfate reductase
## 796 sulfate permease
## 797 sulfate adenylyltransferase
## 799 uroporphyrinogen III and precorrin-1 C-methyltransferase
## 800 sirohydrochlorin ferrochelatase
## 805 hypothetical protein
## 806 guanylate kinase
## 808 coenzyme A biosynthesis bifunctional phosphopantothenoylcysteine synthetase/decarboxylase
## 809 primosome assembly protein PriA
## 810 peptide deformylase
## 811 methionyl-tRNA formyltransferase
## 812 RNA-binding Sun protein
## 813 ribosomal RNA large subunit methyltransferase N
## 814 phosphorylated protein phosphatase
## 815 protein kinase
## 816 ribosome-associated GTPase
## 821 hypothetical protein
## 823 L-serine dehydratase subunit beta
## 824 L-serine dehydratase subunit alpha
## 826 fatty acid biosynthesis transcriptional regulator
## 827 glycerol-3-phosphate acyltransferase PlsX
## 828 malonyl CoA-ACP transacylase
## 832 chromosome condensation and segregation SMC ATPase
## 835 DNA-binding protein
## 837 30S ribosomal protein S16
## 839 hypothetical protein
## 840 16S rRNA-processing protein RimM
## 844 ribonuclease HII
## 845 glycosyltransferase
## 847 succinyl-CoA synthetase subunit beta
## 852 site-specific tyrosine recombinase XerC
## 853 ATP-dependent protease peptidase subunit
## 854 ATP-dependent protease ATP-binding subunit HslU
## 856 flagellar basal-body rod protein FlgB
## 857 flagellar basal body rod protein FlgC
## 858 flagellar hook-basal body protein FliE
## 859 flagellar MS-ring protein
## 861 flagellar assembly protein H
## 862 flagellum-specific ATP synthase
## 863 flagellar biosynthesis chaperone
## 864 kinesin-like protein
## 865 flagellar hook-length control protein
## 866 flagellar basal body rod modification protein
## 867 flagellar basal body rod protein FlgG
## 868 flagellar protein
## 869 flagellar basal body protein FliL
## 870 flagellar motor switch protein FliM
## 871 flagellar motor switch protein
## 872 regulator of chemotaxis and motility
## 873 flagella biosynthesis protein FliZ
## 874 flagellar biosynthesis protein FliP
## 875 flagellar biosynthesis protein FliQ
## 876 flagellar biosynthesis protein FliR
## 877 flagellar biosynthesis protein FlhB
## 878 flagellar biosynthesis protein FlhA
## 879 flagellar biosynthesis regulator FlhF
## 880 flagellar assembly machinery protein
## 881 chemotaxis-specific methylesterase
## 882 chemotactic two-component sensor histidine kinase
## 883 modulation of CheA activity in response to attractants (chemotaxis)
## 884 signal terminating phosphatase
## 885 sequence specific deamidase
## 886 RNA polymerase sigma factor SigD
## 890 uridylate kinase
## 892 undecaprenyl pyrophosphate synthase
## 894 1-deoxy-D-xylulose 5-phosphate reductoisomerase
## 895 inner membrane zinc metalloprotease
## 898 hypothetical protein
## 899 transcription elongation factor NusA
## 900 RNA binding protein; new fold
## 901 hypothetical protein
## 902 translation initiation factor IF-2
## 903 hypothetical protein
## 905 tRNA pseudouridine synthase B
## 909 sugar deacetylase
## 912 dipicolinate synthase subunit A
## 915 aspartate kinase
## 918 protein export-enhancing factor
## 923 metalloprotease
## 928 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
## 935 L-threonine 3-dehydrogenase
## 937 (dimethylallyl)adenosine tRNA methylthiotransferase
## 940 DNA mismatch repair protein MutS
## 947 polyketide synthase
## 949 acyl carrier protein
## 950 polyketide beta-ketoacyl:acyl carrier protein synthase
## 951 acetyl-S-AcpK beta-ketothioester polyketide intermediate transferase
## 952 polyketide biosynthesis enoyl-CoA hydratase
## 953 polyketide biosynthesis enoyl-CoA hydratase
## 954 polyketide synthase
## 955 polyketide synthase
## 957 polyketide synthase
## 965 small multidrug efflux transporter
## 969 tRNA delta(2)-isopentenylpyrophosphate transferase
## 973 ribonucleotide reductase stimulatory protein
## 974 ribonucleotide-diphosphate reductase subunit alpha
## 979 GTP-binding protein protease modulator
## 990 hypothetical protein
## 994 H+-xyloside symporter
## 1002 prophage protein
## 1004 thiol disulfide oxidoreductase
## 1005 ribonucleotide-diphosphate reductase subunit beta
## 1007 SPbeta phage ribonucleoside-diphosphate reductase subunit alpha
## 1008 ribonucleotide reductase stimulatory protein
## 1010 hypothetical protein
## 1011 hypothetical protein
## 1012 hypothetical protein
## 1014 cell wall hydrolase
## 1015 hypothetical protein
## 1016 hypothetical protein
## 1017 hypothetical protein
## 1018 hypothetical protein
## 1022 hypothetical protein
## 1023 hypothetical protein
## 1024 hypothetical protein
## 1025 nucleic acid binding protein
## 1026 DNA (cytosine-5-)-methyltransferase
## 1027 hypothetical protein
## 1028 hypothetical protein
## 1029 nucleotide kinase
## 1030 hypothetical protein
## 1031 hypothetical protein
## 1032 hypothetical protein
## 1034 hypothetical protein
## 1035 DNA polymerase
## 1036 ssDNA-binding protein
## 1037 hypothetical protein
## 1038 replicative DNA helicase
## 1039 hypothetical protein
## 1041 hypothetical protein
## 1046 capsid protein
## 1054 hypothetical protein
## 1055 hypothetical protein
## 1060 endonuclease
## 1061 hypothetical protein
## 1063 hypothetical protein
## 1065 hypothetical protein
## 1066 hypothetical protein
## 1068 DNA-binding protein anti-repressor
## 1069 nucleotide-binding protein
## 1070 hypothetical protein
## 1071 hypothetical protein
## 1072 hypothetical protein
## 1073 hypothetical protein
## 1074 hypothetical protein
## 1080 integrase
## 1082 phage integrase
## 1083 transcriptional regulator
## 1084 hypothetical protein
## 1086 hypothetical protein
## 1088 nucleotide binding protein
## 1089 hypothetical protein
## 1090 hypothetical protein
## 1091 hypothetical protein
## 1092 hypothetical protein
## 1102 hypothetical protein
## 1103 hypothetical protein
## 1107 hypothetical protein
## 1110 hypothetical protein
## 1114 hypothetical protein
## 1115 prophage terminase ATP subunit
## 1116 hypothetical protein
## 1117 hypothetical protein
## 1118 hypothetical protein
## 1119 hypothetical protein
## 1120 hypothetical protein
## 1121 hypothetical protein
## 1122 hypothetical protein
## 1123 hypothetical protein
## 1124 hypothetical protein
## 1125 hypothetical protein
## 1126 hypothetical protein
## 1127 hypothetical protein
## 1129 lytic exoenzyme
## 1130 hypothetical protein
## 1131 hypothetical protein
## 1133 hypothetical protein
## 1134 hypothetical protein
## 1137 hypothetical protein
## 1142 hypothetical protein
## 1143 hypothetical protein
## 1144 hypothetical protein
## 1148 bacteriophage SPbeta holin-like protein
## 1150 bacteriophage SPbeta thiol-disulfide oxidoreductase
## 1151 glycosyltransferase
## 1152 bacteriophage SPbeta thiol-disulfide oxidoreductase
## 1156 lesion bypass phage DNA polymerase
## 1159 hypothetical protein
## 1161 acetyl-transferase
## 1163 hypothetical protein
## 1167 SPbeta phage DNA nuclease
## 1173 methionine sulfoxide reductase B
## 1177 hypothetical protein
## 1178 hypothetical protein
## 1183 transcriptional enhancer
## 1185 acyltransferase
## 1186 dihydrofolate reductase
## 1188 phosphatidylglycerophosphatase
## 1190 methyltransferase
## 1194 metal-dependent phosphohydrolase
## 1201 hypothetical protein
## 1203 hypothetical protein
## 1204 hypothetical protein
## 1210 hypothetical protein
## 1212 xanthine permease
## 1215 2-keto-3-deoxygluconate permease
## 1216 2-keto-3-deoxygluconate-6-phosphate aldolase
## 1217 2-keto-3-deoxygluconate kinase
## 1219 5-keto-4-deoxyuronate isomerase
## 1226 hypothetical protein
## 1228 nucleic acid-binding protein
## 1234 hypothetical protein
## 1238 Holliday junction-specific endonuclease
## 1240 hypothetical protein
## 1241 endonuclease III
## 1244 aspartate aminotransferase
## 1245 hypothetical protein
## 1248 aspartate alpha-decarboxylase
## 1249 pantoate--beta-alanine ligase
## 1251 biotin acetyl-CoA-carboxylase ligase and biotin regulon repressor
## 1252 tRNA CCA-pyrophosphorylase
## 1253 hypothetical protein
## 1254 hypothetical protein
## 1255 methylglyoxal synthase
## 1256 dihydrodipicolinate reductase
## 1261 menaquinol:cytochrome c oxidoreductase cytochrome cc subunit
## 1262 cytochrome b6
## 1267 3-phosphoshikimate 1-carboxyvinyltransferase
## 1268 prephenate dehydrogenase
## 1269 histidinol-phosphate aminotransferase
## 1270 tryptophan synthase subunit alpha
## 1271 tryptophan synthase subunit beta
## 1278 uridine kinase
## 1279 hydrolase
## 1280 hydrolase
## 1283 hypothetical protein
## 1284 Holliday junction resolvase-like protein
## 1288 glutamine ABC transporter ATP-binding protein
## 1290 glutamine ABC transporter permease
## 1292 hypothetical protein
## 1293 hypothetical protein
## 1295 exonuclease with DNA/RNA helicase motif
## 1297 tRNA-specific 2-thiouridylase MnmA
## 1298 cysteine desulfurase
## 1302 aspartyl-tRNA synthetase
## 1308 adenine phosphoribosyltransferase
## 1312 bifunctional preprotein translocase subunit SecD/SecF
## 1317 preprotein translocase subunit YajC
## 1318 queuine tRNA-ribosyltransferase
## 1319 S-adenosylmethionine--tRNA ribosyltransferase-isomerase
## 1320 hypothetical protein
## 1321 Holliday junction DNA helicase RuvB
## 1323 Bypass of forespore C, intercompartmental signaling factor
## 1327 hypothetical protein
## 1333 quinolinate synthetase
## 1334 nicotinate-nucleotide pyrophosphorylase
## 1336 cysteine desulfurase
## 1338 prephenate dehydratase
## 1340 GTPase ObgE
## 1342 50S ribosomal protein L27
## 1343 hypothetical protein
## 1345 membrane metalloprotease
## 1347 ATPase activator of MinC
## 1349 cell-shape determining protein
## 1350 rod shape-determining protein MreC
## 1352 DNA repair protein RadC
## 1359 spore coat protein
## 1361 glutamate-1-semialdehyde aminotransferase
## 1362 delta-aminolevulinic acid dehydratase
## 1363 uroporphyrinogen III cosynthase
## 1364 porphobilinogen deaminase
## 1365 negative effector of the concentration of glutamyl-tRNA reductase HemA
## 1368 ribosome biogenesis GTP-binding protein YsxC
## 1374 isopropylmalate isomerase small subunit
## 1376 3-isopropylmalate dehydrogenase
## 1377 2-isopropylmalate synthase
## 1378 ketol-acid reductoisomerase
## 1379 acetolactate synthase 3 regulatory subunit
## 1384 phosphoesterase
## 1385 nucleoside-triphosphatase
## 1388 glutamate racemase
## 1392 succinate dehydrogenase iron-sulfur subunit
## 1393 succinate dehydrogenase flavoprotein subunit
## 1400 electron transfer flavoprotein subunit alpha
## 1401 electron transfer flavoprotein subunit beta
## 1402 enoyl-CoA hydratase
## 1405 hypothetical protein
## 1406 recombination and DNA strand exchange inhibitor protein
## 1408 hypothetical protein
## 1411 phenylalanyl-tRNA synthetase subunit beta
## 1416 glycolate oxidase subunit
## 1420 alpha-L-arabinofuranosidase
## 1421 arabinose/arabinan permease
## 1422 arabinose/arabinan permease
## 1423 sugar-binding lipoprotein
## 1424 metabolite-phosphate dehydrogenase
## 1425 phosphatase
## 1426 L-ribulose-5-phosphate 4-epimerase
## 1427 ribulokinase
## 1433 50S ribosomal protein L20
## 1434 50S ribosomal protein L35
## 1437 antiholin-like protein LrgB
## 1439 two-component response regulator LytS
## 1444 hypothetical protein
## 1445 primosomal protein DnaI
## 1451 transporter
## 1453 dephospho-CoA kinase
## 1455 formamidopyrimidine-DNA glycosylase
## 1457 two-component sensor histidine kinase
## 1459 malate dehydrogenase
## 1465 pyruvate kinase
## 1467 acetyl-CoA carboxylase carboxyltransferase subunit alpha
## 1471 membrane proteinrocess
## 1477 transporter
## 1478 aminohydrolase
## 1479 RNA-binding riboflavin kinase
## 1480 monooxygenase
## 1481 redoxin
## 1482 monooxygenase
## 1483 sulfur-containing amino-acid ABC transporter ATP-binding protein
## 1484 sulfur-containing amino acid ABC transporter permease
## 1485 sulfur-containing amino acid ABC transporter permease
## 1486 sulfur-containing amino acid ABC transporter binding lipoprotein
## 1487 sulfur containing amino acid ABC transporter binding lipoprotein
## 1493 argininosuccinate lyase
## 1499 hypothetical protein
## 1501 hypothetical protein
## 1504 metal-dependent hydrolase
## 1507 thiamine biosynthesis protein ThiI
## 1517 hypothetical protein
## 1519 protein acetyltransferase
## 1520 acetoin degradation regulation pathway protein
## 1522 flagellar motor protein MotS
## 1526 hypothetical protein
## 1527 hypothetical protein
## 1531 hypothetical protein
## 1532 hypothetical protein
## 1542 pullulanase
## 1543 phospholipid kinase
## 1544 hydrolase
## 1549 ABC transporter permease
## 1557 hypothetical protein
## 1558 dehydrogenase of rhamnogalaturonan degradation
## 1559 lipoprotein
## 1560 unsaturated rhamnogalacturonyl hydrolase
## 1563 ABC transporter binding lipoprotein
## 1567 biotin synthase
## 1568 dithiobiotin synthetase
## 1569 8-amino-7-oxononanoate synthase
## 1570 adenosylmethionine-8-amino-7-oxononanoate aminotransferase
## 1573 LacI family transcriptional regulator
## 1574 multiple sugar-binding lipoprotein
## 1575 carbohydrate ABC transporter permease
## 1576 maltose and multiple sugars ABC transporter permease
## 1584 ABC transporter permease
## 1586 two-component sensor histidine kinase
## 1588 metabolite permease
## 1589 ABC transporter ATP-binding protein
## 1590 ABC transporter permease
## 1591 ABC transporter permease
## 1592 ABC transporter ATP-binding protein
## 1595 Fe-S oxidoreductase
## 1597 hypothetical protein
## 1606 ABC transporter
## 1607 ABC transporter ATP-binding protein
## 1618 cytochrome d oxidase subunit
## 1621 manganese ABC transporter permease
## 1622 manganese ABC transporter permease
## 1623 manganese ABC transporter ATP-binding protein
## 1625 O-succinylbenzoate-CoA synthase
## 1627 naphthoate synthase
## 1628 esterase
## 1629 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
## 1633 UDP-glucose dehydrogenase
## 1634 UDP-glucose epimerase
## 1636 hypothetical protein
## 1637 spore coat protein
## 1641 glycogen phosphorylase
## 1642 glycogen synthase
## 1643 glucose-1-phosphate adenylyltransferase
## 1644 glucose-1-phosphate adenylyltransferase
## 1647 acetyl-transferase
## 1648 flotillin-like protein
## 1652 choline dehydrogenase
## 1656 potassium uptake protein
## 1665 L-rhamnose isomerase
## 1666 L-rhamnose mutarotase
## 1667 rhamnulokinase
## 1678 hypothetical protein
## 1679 metal-dependent protease/peptidase
## 1681 atypical membrane-integrating protein
## 1690 hypothetical protein
## 1695 two-component sensor histidine kinase
## 1699 penicillin-binding protein 4
## 1702 sensory histidine kinase DcuS
## 1705 carbohydrate ABC transporter ATP-binding protein
## 1706 permease
## 1710 monovalent cation/H+ antiporter subunit A
## 1711 monovalent cation/H+ antiporter subunit B
## 1712 monovalent cation/H+ antiporter subunit C
## 1713 monovalent cation/H+ antiporter subunit D
## 1714 monovalent cation/H+ antiporter subunit E
## 1715 monovalent cation/H+ antiporter subunit F
## 1717 esterase
## 1719 two-component sensor histidine kinase
## 1720 competence pheromone precursor (pheromone peptide aa 46->55, modified)
## 1725 nicotinate phosphoribosyltransferase
## 1735 hypothetical protein
## 1736 bacteriophage SPP1 receptor
## 1738 bacteriocin production protein
## 1744 hypothetical protein
## 1745 siderophore 2,3-dihydroxybenzoate-glycine-threonine trimeric ester bacillibactin synthetase
## 1746 isochorismatase
## 1747 2,3-dihydroxybenzoate-AMP ligase
## 1748 isochorismate synthase DhbC
## Start End
## 3 3206 3421
## 4 3437 4549
## 10 41657 42484
## 12 42917 43660
## 13 43647 43946
## 19 50087 50647
## 25 54441 55298
## 28 56352 57722
## 35 64817 66415
## 36 66405 67874
## 38 68216 68518
## 39 68515 69150
## 43 73106 73843
## 45 74929 76347
## 48 79092 79868
## 49 79880 80755
## 52 82864 84276
## 53 84290 84874
## 54 84874 85755
## 55 85737 86594
## 56 86587 86949
## 57 86946 87449
## 58 87401 87610
## 61 101449 101913
## 62 101927 102484
## 63 102484 103575
## 65 106096 107472
## 67 108674 109774
## 68 109789 110487
## 71 112800 113453
## 72 113450 114850
## 73 114854 115285
## 74 115269 116018
## 77 117349 117498
## 82 120061 120561
## 89 518657 518938
## 91 519408 520232
## 92 520237 520602
## 93 520606 521007
## 95 522088 522417
## 96 522414 522896
## 97 522862 523650
## 99 524492 524785
## 100 524782 525222
## 104 529505 530611
## 105 530624 531133
## 107 531787 531981
## 110 532922 533302
## 111 533338 534780
## 113 536096 536365
## 114 536404 536670
## 115 536687 536995
## 116 536985 538049
## 117 538061 538309
## 118 538322 538846
## 119 538836 541229
## 120 541248 541574
## 121 541578 544025
## 122 544022 545011
## 126 547306 548481
## 135 556562 556738
## 161 579541 579876
## 169 587157 587336
## 171 587744 588967
## 178 596478 597098
## 186 601741 602172
## 187 602185 602427
## 189 603012 603599
## 195 608933 609391
## 197 612191 612820
## 207 622293 622790
## 212 626622 626933
## 213 626933 627265
## 214 627284 628612
## 216 630170 630883
## 217 630912 631811
## 218 631808 632755
## 220 640662 641639
## 221 641654 642130
## 222 642111 642800
## 223 642810 643265
## 226 646582 647094
## 227 647091 647738
## 228 647760 647933
## 230 648742 648933
## 232 649903 650187
## 236 655223 656506
## 238 659623 660564
## 239 660596 661627
## 248 671994 673019
## 249 673019 673783
## 258 681547 682362
## 261 685155 686564
## 264 688184 689146
## 265 689146 690342
## 271 697538 698092
## 273 698612 699100
## 274 699093 700235
## 276 701601 702326
## 277 702319 702573
## 278 702570 703253
## 279 703237 705465
## 281 706973 708013
## 282 708010 708597
## 283 708594 710132
## 288 713664 715406
## 289 715433 716428
## 293 719370 721589
## 294 721613 723619
## 299 728732 729022
## 300 729038 730495
## 308 740288 742927
## 313 747079 747534
## 316 750959 752089
## 321 754480 754923
## 323 755907 756155
## 324 756139 756402
## 326 757111 757653
## 328 758093 758722
## 329 758719 760452
## 331 761662 762945
## 332 762942 763871
## 333 763875 764765
## 334 764781 765815
## 335 765838 768123
## 336 768137 768835
## 337 768828 769490
## 339 770234 772096
## 341 774138 774791
## 342 774799 776790
## 345 781092 782048
## 346 782062 782949
## 352 787992 788636
## 360 799303 800208
## 361 800232 801143
## 362 801172 802350
## 367 807091 808548
## 380 822903 823703
## 381 823716 824717
## 385 827252 827419
## 389 830945 832573
## 390 832545 833225
## 403 844097 844234
## 406 846182 847258
## 407 847282 847482
## 408 847498 848652
## 411 851850 853535
## 418 862004 862474
## 419 862492 862812
## 424 867164 868006
## 434 877599 878051
## 436 879002 880003
## 437 880007 881035
## 438 881049 882245
## 444 886775 887332
## 445 887364 888131
## 446 888143 889366
## 449 891436 892200
## 451 893904 895625
## 453 897588 897992
## 456 900080 901528
## 457 901555 902496
## 459 903811 905013
## 461 905816 906751
## 462 906764 907954
## 467 911964 912581
## 474 920474 921475
## 481 925633 926427
## 487 929406 929738
## 513 961394 962161
## 514 962179 963177
## 515 963174 964004
## 519 966196 966669
## 523 969162 970097
## 525 970667 971383
## 526 971374 972087
## 530 976569 977033
## 531 977069 977734
## 532 977775 979373
## 533 979396 979926
## 534 979939 980313
## 535 980313 980468
## 536 980473 981234
## 537 981237 981602
## 538 981604 982302
## 539 982319 983236
## 549 991348 995001
## 554 997724 998386
## 556 1000364 1001716
## 558 1002501 1003325
## 562 1008668 1009807
## 563 1009804 1010448
## 580 1028233 1028523
## 581 1028511 1029587
## 589 1036953 1037309
## 590 1037306 1037701
## 600 1045318 1047075
## 602 1049142 1049762
## 606 1050811 1052172
## 613 1059203 1060420
## 618 1062591 1063487
## 620 1064846 1066072
## 634 1077440 1078183
## 635 1078176 1079402
## 639 1082870 1083184
## 643 1087250 1088182
## 649 1095063 1096103
## 653 1098412 1099146
## 664 1109388 1110482
## 665 1110479 1111918
## 674 1119162 1120631
## 677 1121550 1122173
## 682 1126400 1127452
## 683 1127466 1128314
## 691 1136320 1139820
## 693 1143577 1144752
## 694 1144749 1148141
## 696 1148494 1148721
## 697 1148744 1149145
## 698 1149145 1149321
## 699 1149318 1149935
## 700 1149958 1150200
## 712 1162267 1163130
## 720 1169877 1170476
## 723 1172650 1173336
## 726 1174861 1175976
## 728 1177365 1178213
## 733 1182448 1183032
## 734 1183029 1183958
## 736 1184657 1185004
## 737 1185001 1185588
## 747 1192858 1194288
## 749 1195034 1196071
## 750 1196091 1197311
## 751 1197326 1198102
## 753 1199327 1200388
## 754 1200381 1203473
## 760 1206629 1207582
## 763 1208222 1209160
## 766 1211477 1212463
## 768 1215243 1216193
## 773 1221594 1222529
## 774 1222533 1223450
## 775 1223455 1224531
## 782 1229915 1231036
## 785 1233614 1234513
## 789 1236609 1236977
## 790 1237006 1237641
## 795 1630382 1631083
## 796 1631095 1632159
## 797 1632208 1633356
## 799 1634061 1634834
## 800 1634837 1635622
## 805 1641672 1641941
## 806 1641949 1642563
## 808 1642851 1644071
## 809 1644068 1646485
## 810 1646512 1646994
## 811 1646999 1647952
## 812 1647939 1649282
## 813 1649286 1650377
## 814 1650384 1651148
## 815 1651142 1653088
## 816 1653103 1653999
## 821 1656064 1656426
## 823 1658242 1658904
## 824 1658930 1659832
## 826 1661967 1662533
## 827 1662547 1663548
## 828 1663567 1664520
## 832 1666560 1670120
## 835 1671828 1672160
## 837 1673620 1673892
## 839 1674259 1674645
## 840 1674650 1675174
## 844 1677451 1678218
## 845 1678250 1679980
## 847 1680431 1681588
## 852 1687187 1688101
## 853 1688114 1688659
## 854 1688676 1690079
## 856 1691278 1691667
## 857 1691667 1692119
## 858 1692130 1692450
## 859 1692496 1694106
## 861 1695254 1695880
## 862 1695877 1697193
## 863 1697196 1697639
## 864 1697651 1698265
## 865 1698278 1699741
## 866 1699738 1700160
## 867 1700182 1700976
## 868 1701016 1701231
## 869 1701228 1701650
## 870 1701684 1702682
## 871 1702672 1703808
## 872 1703834 1704196
## 873 1704211 1704870
## 874 1704863 1705528
## 875 1705543 1705812
## 876 1705820 1706599
## 877 1706599 1707681
## 878 1707714 1709747
## 879 1709747 1710847
## 880 1710838 1711734
## 881 1711736 1712809
## 882 1712815 1714833
## 883 1714855 1715325
## 884 1715344 1715973
## 885 1715970 1716470
## 886 1716493 1717257
## 890 1719802 1720524
## 892 1721214 1721996
## 894 1722871 1724022
## 895 1724029 1725297
## 898 1731776 1732246
## 899 1732281 1733396
## 900 1733410 1733685
## 901 1733687 1733989
## 902 1734009 1736159
## 903 1736156 1736434
## 905 1736886 1737815
## 909 1741618 1742577
## 912 1744367 1745260
## 915 1747123 1748337
## 918 1751201 1751938
## 923 1757037 1758317
## 928 1762623 1763204
## 935 1770461 1771504
## 937 1772843 1774372
## 940 1775745 1778321
## 947 1785133 1786107
## 949 1788469 1788717
## 950 1788695 1789942
## 951 1789943 1791205
## 952 1791193 1791972
## 953 1792012 1792761
## 954 1792806 1807937
## 955 1807921 1821537
## 957 1834409 1850875
## 965 1864691 1865044
## 969 1866389 1867333
## 973 1868617 1869009
## 974 1868969 1871071
## 979 1875304 1876566
## 990 1884968 1885321
## 994 1887352 1888743
## 1002 1899589 1900050
## 1004 2159742 2159984
## 1005 2159981 2161778
## 1007 2162108 2165614
## 1008 2165577 2165966
## 1010 2166413 2166613
## 1011 2166658 2166852
## 1012 2166873 2167007
## 1014 2167570 2167932
## 1015 2167975 2168100
## 1016 2168114 2168461
## 1017 2168476 2168871
## 1018 2168910 2169452
## 1022 2170309 2170491
## 1023 2170504 2170731
## 1024 2170771 2171136
## 1025 2171139 2171357
## 1026 2171401 2172732
## 1027 2172781 2172900
## 1028 2172932 2173450
## 1029 2173459 2173956
## 1030 2173956 2174111
## 1031 2174104 2174319
## 1032 2174352 2174549
## 1034 2174852 2175568
## 1035 2175596 2179513
## 1036 2179526 2181256
## 1037 2181256 2182392
## 1038 2182408 2183922
## 1039 2183937 2184407
## 1041 2185504 2186418
## 1046 2188204 2189964
## 1054 2194053 2194400
## 1055 2194402 2194758
## 1060 2196389 2197081
## 1061 2197121 2197324
## 1063 2198070 2198264
## 1065 2198848 2199105
## 1066 2199150 2199353
## 1068 2199580 2200335
## 1069 2200376 2200783
## 1070 2200790 2201128
## 1071 2201125 2201475
## 1072 2201488 2201691
## 1073 2201705 2201983
## 1074 2201980 2202384
## 1080 2204192 2205169
## 1082 2206682 2207758
## 1083 2207748 2207960
## 1084 2208008 2208325
## 1086 2208855 2208980
## 1088 2210331 2210747
## 1089 2210749 2211282
## 1090 2211309 2211845
## 1091 2211884 2212015
## 1092 2212026 2212241
## 1102 2219281 2219469
## 1103 2219514 2219765
## 1107 2222340 2222534
## 1110 2227297 2227488
## 1114 2229988 2230908
## 1115 2230895 2232664
## 1116 2232682 2234202
## 1117 2234233 2235669
## 1118 2235694 2236230
## 1119 2236269 2237285
## 1120 2237321 2237791
## 1121 2237806 2238201
## 1122 2238198 2238452
## 1123 2238436 2239086
## 1124 2239083 2239589
## 1125 2239586 2240296
## 1126 2240339 2241136
## 1127 2241154 2241765
## 1129 2242056 2242412
## 1130 2242414 2243631
## 1131 2243642 2243992
## 1133 2244230 2244730
## 1134 2244714 2245133
## 1137 2246656 2247342
## 1142 2256062 2256820
## 1143 2256832 2259459
## 1144 2259475 2260296
## 1148 2264680 2264892
## 1150 2265225 2265671
## 1151 2265668 2266936
## 1152 2266936 2267349
## 1156 2270407 2271657
## 1159 2272534 2272890
## 1161 2273989 2274522
## 1163 2275200 2275697
## 1167 2279977 2280867
## 1173 2287097 2287528
## 1177 2290078 2290272
## 1178 2290285 2290848
## 1183 2294286 2295281
## 1185 2295982 2296602
## 1186 2296603 2297109
## 1188 2297984 2298517
## 1190 2299406 2300179
## 1194 2303920 2304537
## 1201 2308792 2308974
## 1203 2309730 2310419
## 1204 2310419 2310817
## 1210 2316446 2316952
## 1212 2318127 2319443
## 1215 2321972 2322964
## 1216 2323009 2323599
## 1217 2323601 2324575
## 1219 2325854 2326681
## 1226 2332153 2332782
## 1228 2333324 2334565
## 1234 2338809 2339180
## 1238 2340802 2341422
## 1240 2344264 2344758
## 1241 2344755 2345414
## 1244 2347660 2348841
## 1245 2348864 2349349
## 1248 2352592 2352975
## 1249 2352977 2353837
## 1251 2354918 2355895
## 1252 2355880 2357073
## 1253 2357078 2358211
## 1254 2358208 2358918
## 1255 2358911 2359324
## 1256 2359340 2360143
## 1261 2363111 2363878
## 1262 2363913 2364587
## 1267 2367954 2369240
## 1268 2369251 2370366
## 1269 2370415 2371497
## 1270 2371508 2372311
## 1271 2372304 2373506
## 1278 2792218 2792853
## 1279 2792860 2794128
## 1280 2794147 2795076
## 1283 2797100 2797381
## 1284 2797399 2797815
## 1288 2802358 2803086
## 1290 2803990 2804640
## 1292 2805348 2805479
## 1293 2805501 2805692
## 1295 2806286 2808682
## 1297 2809413 2810528
## 1298 2810559 2811698
## 1302 2814743 2816521
## 1308 2822901 2823413
## 1312 2826900 2829113
## 1317 2832424 2832690
## 1318 2832727 2833872
## 1319 2833899 2834927
## 1320 2834957 2835157
## 1321 2835150 2836154
## 1323 2836909 2837421
## 1327 2841169 2841300
## 1333 2845955 2847061
## 1334 2847048 2847917
## 1336 2849569 2850756
## 1338 2851283 2852140
## 1340 2852661 2853947
## 1342 2854880 2855164
## 1343 2855177 2855515
## 1345 2855973 2856839
## 1347 2857776 2858582
## 1349 2859317 2859835
## 1350 2859832 2860704
## 1352 2861840 2862535
## 1359 2869964 2870989
## 1361 2872880 2874172
## 1362 2874202 2875176
## 1363 2875173 2875961
## 1364 2875951 2876895
## 1365 2876928 2877758
## 1368 2879882 2880469
## 1374 2888940 2889539
## 1376 2891020 2892117
## 1377 2892138 2893694
## 1378 2893681 2894709
## 1379 2894733 2895251
## 1384 2900020 2900529
## 1385 2900545 2901141
## 1388 2903217 2904035
## 1392 2905571 2906332
## 1393 2906335 2908095
## 1400 2915365 2916342
## 1401 2916378 2917151
## 1402 2917166 2917942
## 1405 2920517 2920921
## 1406 2920936 2923293
## 1408 2925100 2925633
## 1411 2927008 2929422
## 1416 2933185 2934597
## 1420 2938330 2939832
## 1421 2939851 2940696
## 1422 2940697 2941638
## 1423 2941674 2942975
## 1424 2943006 2944190
## 1425 2944187 2945005
## 1426 2944983 2945672
## 1427 2945689 2947371
## 1433 2952224 2952583
## 1434 2952615 2952815
## 1437 2954492 2955187
## 1439 2955783 2956508
## 1444 2962510 2963151
## 1445 2963185 2964120
## 1451 2968824 2970014
## 1453 2970922 2971515
## 1455 2972329 2973159
## 1457 2976068 2977807
## 1459 2978734 2979672
## 1465 2984788 2986545
## 1467 2987731 2988708
## 1471 2994756 2995097
## 1477 2998796 2999698
## 1478 2999717 3000967
## 1479 3000985 3001677
## 1480 3001724 3003052
## 1481 3003049 3003330
## 1482 3003345 3004349
## 1483 3004346 3005125
## 1484 3005122 3005829
## 1485 3005859 3006578
## 1486 3006600 3007412
## 1487 3007426 3008235
## 1493 3011751 3013136
## 1499 3018309 3018764
## 1501 3019533 3020027
## 1504 3022068 3023657
## 1507 3025748 3026953
## 1517 3038060 3038203
## 1519 3040092 3040724
## 1520 3040751 3041395
## 1522 3042566 3043294
## 1526 3046757 3047083
## 1527 3047107 3047562
## 1531 3052743 3053348
## 1532 3053364 3054173
## 1542 3061651 3063807
## 1543 3063833 3064762
## 1544 3064811 3065725
## 1549 3070246 3071403
## 1557 3078643 3079311
## 1558 3079333 3080619
## 1559 3080631 3081134
## 1560 3081131 3082243
## 1563 3085800 3087296
## 1567 3090482 3091489
## 1568 3091492 3092187
## 1569 3092184 3093353
## 1570 3093343 3094689
## 1573 3096782 3097816
## 1574 3097850 3099130
## 1575 3099123 3100034
## 1576 3100031 3100861
## 1584 3109397 3111337
## 1586 3112190 3113194
## 1588 3113979 3115289
## 1589 3115279 3115974
## 1590 3115989 3116966
## 1591 3116996 3117982
## 1592 3117976 3118854
## 1595 3119999 3120967
## 1597 3121538 3122641
## 1606 3132370 3133374
## 1607 3133387 3134169
## 1618 3139431 3140762
## 1621 3142077 3142964
## 1622 3142954 3144261
## 1623 3144267 3145019
## 1625 3146238 3147353
## 1627 3148901 3149716
## 1628 3149751 3150575
## 1629 3150563 3152305
## 1633 3155725 3157011
## 1634 3157008 3157958
## 1636 3159258 3159689
## 1637 3159691 3160746
## 1641 3163735 3166131
## 1642 3166118 3167572
## 1643 3167569 3168600
## 1644 3168624 3169766
## 1647 3179926 3180447
## 1648 3180465 3181994
## 1652 3183867 3185075
## 1656 3188414 3189082
## 1665 3197933 3199207
## 1666 3199233 3199547
## 1667 3199565 3201022
## 1678 3216163 3217452
## 1679 3217496 3218173
## 1681 3218525 3218857
## 1690 3225772 3226932
## 1695 3230067 3231353
## 1699 3233911 3235785
## 1702 3237157 3238758
## 1705 3241085 3242617
## 1706 3242610 3243656
## 1710 3246598 3249003
## 1711 3248996 3249427
## 1712 3249427 3249768
## 1713 3249761 3251242
## 1714 3251248 3251724
## 1715 3251724 3252008
## 1717 3252405 3252785
## 1719 3253529 3255838
## 1720 3255853 3256020
## 1725 3259403 3260875
## 1735 3266200 3266655
## 1736 3266687 3269917
## 1738 3274462 3275817
## 1744 3280294 3280503
## 1745 3280519 3287655
## 1746 3287675 3288613
## 1747 3288641 3290260
## 1748 3290289 3291485You can also embed plots, for example:
E_coli <- read.table("C:/Users/Chris/git-test/BInfo_528_Assignment4/E_coli_K12_MG1655.ptt", sep="\t", header=TRUE, skip=2)## Warning in scan(file = file, what = what, sep = sep, quote = quote, dec = dec,
## : EOF within quoted stringE_coli <- na.omit(E_coli)
# Function to split and convert a single value
extract_numbers <- function(value) {
parts <- unlist(strsplit(value, "\\.."))
return(as.numeric(parts))
}
# Apply the function to the whole column and create two new columns
numbers <- t(sapply(E_coli$Location, extract_numbers))
E_coli$Start <- numbers[, 1]
E_coli$End <- numbers[, 2]
E_coli <- na.omit(E_coli)
View(E_coli)
# Loop through each row of the df
E_coli_operon=data.frame()
for(i in 1:(nrow(E_coli) - 1)) {
if(!is.na(E_coli$Strand[i]) && !is.na(E_coli$Strand[i + 1]) && E_coli$Strand[i] == E_coli$Strand[i+1]) {
if((E_coli$Start[i+1]-E_coli$End[i] ) < 50) {
E_coli_operon <- rbind(E_coli_operon, E_coli[i, ])
}
}
}
# Print the results
print(E_coli_operon)## Location Strand Length PID Gene Synonym Code COG
## 2 337..2799 + 820 16127996 thrA b0002 - COG0527E
## 3 2801..3733 + 310 16127997 thrB b0003 - COG0083E
## 11 10643..11356 - 237 16128005 yaaW b0011 - COG4735S
## 16 16751..16960 - 69 16128012 mokC b0018 - -
## 20 19811..20314 - 167 16128015 insB b0021 - COG1662L
## 23 21181..21399 + 72 16128018 yaaY b0024 - -
## 24 21407..22348 + 313 16128019 ribF b0025 - COG0196H
## 25 22391..25207 + 938 16128020 ileS b0026 - COG0060J
## 27 25826..26275 + 149 16128022 fkpB b0028 - COG1047O
## 31 29651..30799 + 382 16128026 carA b0032 - COG0505EF
## 34 34781..35371 - 196 90111080 caiE b0035 - COG0663R
## 38 39244..40386 - 380 16128033 caiA b0039 - COG1960I
## 40 42403..43173 + 256 90111081 fixA b0041 - COG2086C
## 42 44180..45466 + 428 16128037 fixC b0043 - COG0644C
## 45 47246..47776 + 176 16128040 kefF b0046 - COG2249R
## 48 50380..51222 - 280 16128043 apaH b0049 - COG0639T
## 49 51229..51606 - 125 16128044 apaG b0050 - COG2967P
## 50 51609..52430 - 273 16128045 rsmA b0051 - COG0030J
## 51 52427..53416 - 329 16128046 pdxA b0052 - COG1995H
## 55 59687..60346 - 219 16128052 rluA b0058 - COG0564J
## 59 66835..68337 - 500 16128056 araA b0062 - COG2160G
## 63 72229..72927 - 232 16128060 thiQ b0066 - COG3840H
## 64 72911..74521 - 536 16128061 thiP b0067 - COG1178P
## 69 78848..79453 - 201 16128065 leuD b0071 - COG0066E
## 70 79464..80864 - 466 16128066 leuC b0072 - COG0065E
## 71 80867..81958 - 363 90111082 leuB b0073 - COG0473CE
## 75 85630..87354 + 574 90111084 ilvI b0077 - COG0028EH
## 78 89634..90092 + 152 16128074 mraZ b0081 - COG2001S
## 79 90094..91035 + 313 16128075 rsmH b0082 - COG0275M
## 80 91032..91397 + 121 16128076 ftsL b0083 - COG3116D
## 81 91413..93179 + 588 16128077 ftsI b0084 - COG0768M
## 82 93166..94653 + 495 16128078 murE b0085 - COG0769M
## 83 94650..96008 + 452 16128079 murF b0086 - COG0770M
## 84 96002..97084 + 360 16128080 mraY b0087 - COG0472M
## 85 97087..98403 + 438 16128081 murD b0088 - COG0771M
## 86 98403..99647 + 414 16128082 ftsW b0089 - COG0772D
## 88 100765..102240 + 491 16128084 murC b0091 - COG0773M
## 89 102233..103153 + 306 16128085 ddlB b0092 - COG1181M
## 90 103155..103985 + 276 16128086 ftsQ b0093 - COG1589M
## 97 111649..111846 - 65 16128094 yacG b0101 - COG3024S
## 98 111856..112599 - 247 16128095 yacF b0102 - COG4582S
## 101 114522..115724 - 400 16128099 hofC b0106 - COG1459NU
## 102 115714..117099 - 461 16128100 hofB b0107 - COG2804NU
## 105 118733..119284 + 183 16128103 ampD b0110 - COG3023V
## 109 123017..125680 + 887 16128107 aceE b0114 - COG2609C
## 115 134788..135582 - 264 16128113 speD b0120 - COG1586E
## 122 142779..143705 + 308 16128120 yadG b0127 - COG1131V
## 128 147944..148795 - 283 16128126 panC b0133 - COG0414H
## 131 151003..151599 - 198 16128129 yadK b0136 - COG3539NU
## 132 151626..152231 - 201 16128130 yadL b0137 - -
## 133 152243..152812 - 189 90111089 yadM b0138 - COG3539NU
## 134 152829..155426 - 865 16128132 htrE b0139 - COG3188NU
## 137 157253..157732 - 159 16128135 folK b0142 - COG0801H
## 139 159186..160112 - 308 226524698 gluQ b0144 - COG0008J
## 141 160782..161486 - 234 16128139 sfsA b0146 - COG1489R
## 146 169778..170575 + 265 16128144 fhuC b0151 - COG1120PH
## 147 170575..171465 + 296 16128145 fhuD b0152 - COG0614P
## 152 177001..177624 - 207 16128150 yadS b0157 - COG2860S
## 153 177662..178462 - 266 16128151 btuF b0158 - COG0614P
## 159 510865..511797 + 310 16128469 ybaS b0485 - COG2066E
## 162 513625..514083 - 152 145698226 ybbJ b0488 - COG1585OU
## 164 515143..515820 + 225 16128474 ybbL b0490 - COG4619R
## 167 517564..518373 - 269 16128477 ybbO b0493 - COG0300R
## 169 518957..519643 + 228 16128479 ybbA b0495 - COG4181Q
## 171 522485..526765 + 1426 16128481 rhsD b0497 - COG3209M
## 177 533140..534921 + 593 16128491 gcl b0507 - COG3960R
## 182 539789..541090 + 433 90111145 ybbY b0513 - COG2233F
## 184 542485..543270 - 261 16128499 ylbA b0515 - COG3257R
## 185 543281..544516 - 411 16128500 allC b0516 - COG0624E
## 188 548850..549665 + 271 16128504 ylbF b0520 - -
## 190 550750..551817 - 355 16128506 purK b0522 - COG0026F
## 192 552441..553163 - 240 16128508 lpxH b0524 - COG2908S
## 196 555884..556096 - 70 90111146 ybcJ b0528 - COG2501S
## 199 558197..558889 + 230 16128515 sfmC b0531 - COG3121NU
## 200 558920..561523 + 867 16128516 sfmD b0532 - COG3188NU
## 201 561559..562542 + 327 145698227 sfmH b0533 - COG3539NU
## 205 566065..566364 + 99 226524703 insE b0540 - -
## 209 570116..570667 + 183 16128528 ybcL b0545 - COG1881R
## 211 571591..571692 + 33 145698228 ylcH b4588 - -
## 212 571689..572144 + 151 16128530 ybcN b0547 - -
## 213 572144..572314 + 56 16128531 ninE b0548 - -
## 214 572307..572597 + 96 16128532 ybcO b0549 - -
## 215 572594..572956 + 120 16128533 rusA b0550 - COG4570L
## 219 576621..576836 + 71 16128537 essD b0554 - -
## 220 576836..577333 + 165 16128538 rrrD b0555 - COG3772R
## 221 577330..577791 + 153 16128539 rzpD b0556 - -
## 231 586314..587204 - 296 16128550 ybcH b0567 - -
## 232 587205..590177 - 990 16128551 nfrA b0568 - COG5010U
## 234 592551..593993 - 480 16128553 cusS b0570 - COG0642T
## 237 596354..596686 + 110 16128556 cusF b0573 - COG5569S
## 238 596702..597925 + 407 16128557 cusB b0574 - COG0845M
## 250 612038..613162 + 374 16128568 fes b0585 - COG2382P
## 251 613165..613383 + 72 94541099 ybdZ b4511 - COG3251S
## 254 618607..619422 - 271 16128571 fepC b0588 - COG1120PH
## 255 619419..620411 - 330 16128572 fepG b0589 - COG4779P
## 259 624108..625283 + 391 16128576 entC b0593 - COG1169HQ
## 260 625293..626903 + 536 16128577 entE b0594 - COG1021Q
## 261 626917..627774 + 285 16128578 entB b0595 - COG1535Q
## 262 627774..628520 + 248 16128579 entA b0596 - COG1028IQR
## 268 633970..634599 - 209 16128584 ybdM b0601 - COG1475K
## 280 669154..669795 - 213 16128622 nadD b0639 - COG1057H
## 281 669797..670828 - 343 16128623 holA b0640 - COG1466L
## 282 670828..671409 - 193 16128624 lptE b0641 - COG2980M
## 286 675934..676641 + 235 16128628 ybeR b0645 - -
## 289 678731..679438 + 235 16128631 ybeU b0648 - -
## 293 683753..684478 - 241 16128635 gltL b0652 - COG1126E
## 294 684478..685152 - 224 16128636 gltK b0653 - COG0765E
## 298 688566..690104 - 512 16128640 lnt b0657 - COG0815M
## 300 691097..691564 - 155 16128642 ybeY b0659 - COG0319R
## 305 698797..699549 - 250 16128651 nagD b0675 - COG0647G
## 306 699597..700817 - 406 16128652 nagC b0676 - COG1940KG
## 313 709423..709869 - 148 16128659 fur b0683 - COG0735P
## 318 712210..712755 + 181 16128663 seqA b0687 - COG3057L
## 321 716169..717488 - 439 16128668 potE b0692 - COG0531E
## 324 720279..720956 - 225 16128670 kdpE b0694 - COG0745TK
## 325 720953..723637 - 894 16128671 kdpD b0695 - COG2205T
## 326 723630..724202 - 190 16128672 kdpC b0696 - COG2156P
## 327 724211..726259 - 682 16128673 kdpB b0697 - COG2216P
## 328 726282..727955 - 557 16128674 kdpA b0698 - COG2060P
## 331 728806..732999 + 1397 16128676 rhsC b0700 - COG3209M
## 335 738224..738733 + 169 16128682 ybgA b0707 - COG3272S
## 338 742050..742793 + 247 16128685 ybgI b0710 - COG0327S
## 339 742816..743472 + 218 16128686 ybgJ b0711 - COG2049E
## 340 743466..744398 + 310 16128687 ybgK b0712 - COG1984E
## 341 744388..745122 + 244 16128688 ybgL b0713 - COG1540R
## 344 747144..748205 - 353 90111164 ybgO b0716 - -
## 345 748202..748930 - 242 16128692 ybgP b0717 - COG3121NU
## 349 754400..754789 + 129 16128696 sdhC b0721 - COG2009C
## 350 754783..755130 + 115 16128697 sdhD b0722 - COG2142C
## 351 755130..756896 + 588 16128698 sdhA b0723 - COG1053C
## 353 757929..760730 + 933 16128701 sucA b0726 - COG0567C
## 355 762237..763403 + 388 16128703 sucC b0728 - COG0045C
## 358 765207..767183 + 658 16128706 mngA b0731 - COG1299G
## 360 770681..772249 + 522 90111166 cydA b0733 - COG1271C
## 361 772265..773404 + 379 16128709 cydB b0734 - COG1294C
## 362 773419..773532 + 37 94541102 ybgT b4515 - COG4890S
## 364 773975..774379 + 134 16128711 ybgC b0736 - COG0824R
## 365 774376..775068 + 230 16128712 tolQ b0737 - COG0811U
## 368 776963..778255 + 430 16128715 tolB b0740 - COG0823U
## 369 778290..778811 + 173 16128716 pal b0741 - COG2885M
## 371 781308..782351 + 347 16128718 nadA b0750 - COG0379H
## 377 787020..788060 - 346 16128724 galM b0756 - COG2017G
## 378 788054..789202 - 382 16128725 galK b0757 - COG0153G
## 379 789206..790252 - 348 16128726 galT b0758 - COG1085C
## 384 794312..795085 + 257 16128731 modA b0763 - COG0725P
## 385 795085..795774 + 229 16128732 modB b0764 - COG4149P
## 396 808567..809607 + 346 16128743 bioB b0775 - COG0502H
## 397 809604..810758 + 384 16128744 bioF b0776 - COG0156H
## 398 810745..811500 + 251 16128745 bioC b0777 - COG2226H
## 402 816267..817256 + 329 16128749 moaA b0781 - COG2896H
## 403 817278..817790 + 170 16128750 moaB b0782 - COG0521H
## 404 817793..818278 + 161 16128751 moaC b0783 - COG0315H
## 405 818271..818516 + 81 16128752 moaD b0784 - COG1977H
## 409 820765..821721 - 318 16128756 ybhN b0788 - COG0392S
## 410 821721..822962 - 413 16128757 ybhO b0789 - COG1502I
## 413 824225..825331 - 368 16128760 ybhR b0792 - COG0842V
## 414 825342..826475 - 377 16128761 ybhS b0793 - COG0842V
## 415 826468..828204 - 578 90111168 ybhF b0794 - COG1131V
## 416 828197..829195 - 332 16128763 ybhG b0795 - COG1566V
## 420 832293..834443 + 716 16128767 dinG b0799 - COG1199KL
## 425 837753..838430 - 225 90111170 ybiX b0804 - COG3128S
## 430 844964..845686 - 240 16128777 glnQ b0809 - COG1126E
## 438 852406..852873 + 155 16128785 mntR b0817 - COG1321K
## 444 859397..861829 - 810 16128791 ybiW b0823 - COG1882C
## 447 863603..864352 - 249 16128794 moeB b0826 - COG0476H
## 449 865791..866756 + 321 16128796 iaaA b0828 - COG1446E
## 450 866743..868614 + 623 145698235 gsiA b0829 - COG1123R
## 451 868634..870172 + 512 16128798 gsiB b0830 - COG0747E
## 452 870190..871110 + 306 16128799 gsiC b0831 - COG0601EP
## 454 872202..874550 + 782 16128801 yliE b0833 - COG2200T
## 465 884539..885354 - 271 90111176 ybjI b0844 - COG0561R
## 471 890136..890423 + 95 16128818 ybjC b0850 - -
## 476 894214..895347 + 377 90111177 potG b0855 - COG3842E
## 477 895357..896310 + 317 16128824 potH b0856 - COG1176E
## 479 897212..897700 + 162 16128826 ybjO b0858 - -
## 482 900089..900757 - 222 16128829 artM b0861 - COG4160E
## 483 900757..901473 - 238 16128830 artQ b0862 - COG4215E
## 484 901480..902211 - 243 16128831 artI b0863 - COG0834ET
## 487 903816..904139 + 107 16128834 ybjQ b0866 - COG0393S
## 490 906075..907505 - 476 90111179 ybjT b0869 - COG0702MG
## 491 907516..908517 - 333 16128838 ltaE b0870 - COG2008E
## 493 910405..911373 - 322 16128840 hcr b0872 - COG1018C
## 499 918458..919573 + 371 90111182 macA b0878 - COG0845M
## 502 922136..922456 + 106 16128849 clpS b0881 - COG2127S
## 505 925951..926655 - 234 16128852 aat b0885 - COG2360O
## 506 926697..928418 - 573 16128853 cydC b0886 - COG4987CO
## 511 936595..937206 + 203 145698236 lolA b0891 - COG2834M
## 514 940182..942626 + 814 90111183 dmsA b0894 - COG0243C
## 515 942637..943254 + 205 16128862 dmsB b0895 - COG0437C
## 533 963543..965807 + 754 90111187 ycaI b0913 - COG2333R
## 534 965844..967592 + 582 16128881 msbA b0914 - COG1132V
## 546 1349852..1350658 - 268 16129251 sapF b1290 - COG4167V
## 547 1350660..1351652 - 330 16129252 sapD b1291 - COG4170V
## 548 1351652..1352542 - 296 16129253 sapC b1292 - COG4171V
## 549 1352529..1353494 - 321 16129254 sapB b1293 - COG4168V
## 554 1359144..1359908 + 254 90111245 puuD b1298 - COG2071R
## 556 1360767..1362254 + 495 16129261 puuC b1300 - COG1012C
## 557 1362256..1363536 + 426 16129262 puuB b1301 - COG0665E
## 561 1366825..1367049 + 74 16129266 pspB b1305 - -
## 562 1367049..1367408 + 119 16129267 pspC b1306 - COG1983KT
## 565 1368240..1369919 + 559 90111247 ycjM b1309 - COG0366G
## 566 1369933..1371225 + 430 16129271 ycjN b1310 - COG1653G
## 567 1371246..1372127 + 293 16129272 ycjO b1311 - COG1175G
## 568 1372114..1372956 + 280 16129273 ycjP b1312 - COG0395G
## 569 1372987..1374039 + 350 16129274 ycjQ b1313 - COG1063ER
## 570 1374058..1374846 + 262 90111248 ycjR b1314 - COG1082G
## 571 1374856..1375911 + 351 16129276 ycjS b1315 - COG0673R
## 572 1375908..1378175 + 755 16129277 ycjT b1316 - COG1554G
## 576 1382141..1383538 + 465 16129282 ycjX b1321 - COG3106R
## 590 1397745..1398260 - 171 16129296 ogt b1335 - COG0350L
## 591 1398271..1399797 - 508 90111251 abgT b1336 - COG2978H
## 592 1399834..1401279 - 481 16129298 abgB b1337 - COG1473R
## 600 1410024..1411259 - 411 16129306 intR b1345 - COG4974L
## 602 1411555..1411764 - 69 16129308 ydaC b1347 - -
## 604 1412008..1412817 - 269 16129310 recT b1349 - COG3723L
## 607 1415862..1416032 - 56 94541109 ydaE b4526 - -
## 610 1417180..1417335 - 51 94541091 ydaF b4527 - -
## 613 1418389..1418685 + 98 16129318 ydaS b1357 - COG4197S
## 614 1418708..1419130 + 140 16129319 ydaT b1358 - -
## 615 1419143..1420000 + 285 16129320 ydaU b1359 - COG3756S
## 621 1427073..1430435 + 1120 90111261 stfR b1372 - -
## 631 1441075..1443714 + 879 16129342 ydbH b1381 - -
## 632 1443711..1443896 + 61 16129343 ynbE b1382 - -
## 638 1451951..1452880 + 309 16129349 paaA b1388 - COG3396S
## 639 1452892..1453179 + 95 16129350 paaB b1389 - COG3460Q
## 640 1453188..1453934 + 248 16129351 paaC b1390 - COG3396S
## 641 1453949..1454446 + 165 226524712 paaD b1391 - COG2151R
## 642 1454454..1455524 + 356 16129353 paaE b1392 - COG1018C
## 643 1455521..1456288 + 255 16129354 paaF b1393 - COG1024I
## 644 1456288..1457076 + 262 16129355 paaG b1394 - COG1024I
## 645 1457078..1458505 + 475 16129356 paaH b1395 - COG1250I
## 646 1458495..1458917 + 140 16129357 paaI b1396 - COG2050Q
## 647 1458917..1460122 + 401 16129358 paaJ b1397 - COG0183I
## 649 1461563..1462513 + 316 16129360 paaX b1399 - COG3327K
## 652 1465945..1466850 - 301 16129363 insD b1402 - COG2801L
## 657 1475645..1476250 + 201 90111267 ynbA b1408 - COG0558I
## 658 1476250..1477146 + 298 16129370 ynbB b1409 - COG4589R
## 659 1477162..1478919 + 585 16129371 ynbC b1410 - COG2267I
## 667 1489946..1490095 - 49 49176107 hokB b4428 - -
## 676 1498597..1499589 + 330 16129388 tehA b1429 - COG1275P
## 684 1507310..1507486 + 58 94541092 hicA b4532 - -
## 687 1509678..1510823 + 381 16129399 ydcS b1440 - COG0687E
## 688 1510841..1511854 + 337 16129400 ydcT b1441 - COG3842E
## 689 1511855..1512796 + 313 16129401 ydcU b1442 - COG1176E
## 690 1512786..1513580 + 264 16129402 ydcV b1443 - COG1177E
## 695 1515906..1516355 - 149 16129406 ydcZ b1447 - COG3238S
## 710 1533961..1534641 - 226 16129424 narV b1465 - COG2181C
## 711 1534638..1535333 - 231 16129425 narW b1466 - COG2180C
## 712 1535333..1536877 - 514 16129426 narY b1467 - COG1140C
## 717 1545425..1548472 + 1015 16129433 fdnG b1474 - COG0243C
## 718 1548485..1549369 + 294 16129434 fdnH b1475 - COG0437C
## 726 1555136..1556062 - 308 16129442 ddpF b1483 - COG1124EP
## 727 1556055..1557041 - 328 16129443 ddpD b1484 - COG0444EP
## 728 1557038..1557934 - 298 16129444 ddpC b1485 - COG1173EP
## 729 1557931..1558953 - 340 16129445 ddpB b1486 - COG0601EP
## 730 1558955..1560505 - 516 16129446 ddpA b1487 - COG0747E
## 732 1561358..1563757 - 799 162135902 dosP b1489 - COG2200T
## 737 1570431..1573226 - 931 16129453 pqqL b1494 - COG0612R
## 738 1573271..1575643 - 790 16129454 yddB b1495 - COG1629P
## 746 1585817..1586320 - 167 16129462 ydeR b1503 - COG3539NU
## 748 1588878..1590200 - 440 16129466 hipA b1507 - COG3550R
## 752 1599514..1601049 + 511 16129472 lsrA b1513 - COG1129G
## 753 1601043..1602071 + 342 16129473 lsrC b1514 - COG1172G
## 754 1602071..1603063 + 330 16129474 lsrD b1515 - COG1172G
## 755 1603075..1604097 + 340 16129475 lsrB b1516 - COG1879G
## 756 1604124..1604999 + 291 16129476 lsrF b1517 - COG1830G
## 762 1609990..1610349 - 119 16129482 yneG b1523 - -
## 769 1617144..1617578 + 144 90111289 marR b1530 - COG1846K
## 770 1617598..1617981 + 127 90111290 marA b1531 - COG4977K
## 785 1632334..1632909 - 191 16129505 tfaQ b1546 - COG5525R
## 792 1637054..1637551 - 165 16129512 rzpQ b1553 - -
## 794 1637548..1638081 - 177 16129513 rrrQ b1554 - COG3772R
## 795 1638078..1638389 - 103 16129514 ydfR b1555 - -
## 799 1640513..1641265 - 250 90111296 quuQ b1559 - COG0484O
## 803 1643370..1643657 - 95 16129522 relE b1563 - COG2026JD
## 809 1646532..1646687 + 51 16129530 ydfA b1571 - -
## 810 1646689..1646817 + 42 90111298 ydfB b1572 - -
## 812 1647633..1647821 + 62 16129533 dicB b1575 - -
## 814 1650920..1651939 - 339 16129538 rspB b1580 - COG1063ER
## 817 1653832..1654173 + 113 16129541 ynfB b1583 - -
## 822 1658580..1661003 + 807 171701681 ynfF b1588 - COG0243C
## 823 1661014..1661631 + 205 16129547 ynfG b1589 - COG0437C
## 824 1661633..1662487 + 284 16129548 ynfH b1590 - COG3302R
## 834 1670844..1671173 - 109 16129557 mdtI b1599 - COG2076P
## 837 1672996..1674384 - 462 16129560 pntB b1602 - COG1282C
## 840 1677581..1678963 + 460 16129563 ydgI b1605 - COG0531E
## 843 1680183..1680902 + 239 145698268 rstA b1608 - COG0745TK
## 850 1689610..1690875 - 421 90111306 uidC b1615 - -
## 851 1690914..1692287 - 457 16129574 uidB b1616 - COG2211G
## 856 1697379..1698971 + 530 16129579 malX b1621 - COG1263G
## 863 1703791..1704372 + 193 16129585 rsxA b1627 - COG4657C
## 864 1704372..1704950 + 192 16129586 rsxB b1628 - COG2878C
## 865 1704943..1707165 + 740 16129587 rsxC b1629 - COG4656C
## 866 1707166..1708224 + 352 16129588 rsxD b1630 - COG4658C
## 867 1708228..1708848 + 206 16129589 rsxG b1631 - COG4659C
## 868 1708852..1709547 + 231 16129590 rsxE b1632 - COG4660C
## 878 2257741..2259432 - 563 16130105 fruA b2167 - COG1299G
## 879 2259449..2260387 - 312 16130106 fruK b2168 - COG1105G
## 885 2265851..2266837 + 328 16130111 yeiR b2173 - COG0523R
## 889 2270386..2272200 + 604 90111401 yejA b2177 - COG4166E
## 890 2272201..2273295 + 364 16130116 yejB b2178 - COG4174R
## 891 2273295..2274320 + 341 16130117 yejE b2179 - COG4239R
## 894 2276592..2277782 - 396 16130120 bcr b2182 - COG2814G
## 899 2282151..2282378 + 75 16130125 yejL b2187 - COG3082S
## 903 2289380..2290432 - 350 16130131 ccmH b2194 - COG4235O
## 904 2290429..2290986 - 185 16130132 ccmG b2195 - COG0526OC
## 905 2290983..2292926 - 647 16130133 ccmF b2196 - COG1138O
## 906 2292923..2293402 - 159 16130134 ccmE b2197 - COG2332O
## 907 2293399..2293608 - 69 16130135 ccmD b2198 - COG3114U
## 908 2293605..2294342 - 245 16130136 ccmC b2199 - COG0755O
## 909 2294384..2295046 - 220 16130137 ccmB b2200 - COG2386O
## 910 2295043..2295666 - 207 90111402 ccmA b2201 - COG4133O
## 911 2295679..2296281 - 200 16130139 napC b2202 - COG3005C
## 912 2296291..2296740 - 149 90111403 napB b2203 - COG3043C
## 913 2296737..2297600 - 287 16130141 napH b2204 - COG0348C
## 914 2297587..2298282 - 231 16130142 napG b2205 - COG1245R
## 915 2298289..2300775 - 828 16130143 napA b2206 - COG0243C
## 916 2300772..2301035 - 87 16130144 napD b2207 - COG3062P
## 922 2306713..2307363 - 216 16130149 alkB b2212 - COG3145L
## 926 2311510..2314182 + 890 16130153 rcsD b2216 - COG0642T
## 929 2318065..2319891 + 608 16130156 atoS b2219 - COG3852T
## 931 2321469..2322131 + 220 16130158 atoD b2221 - COG1788I
## 932 2322131..2322781 + 216 16130159 atoA b2222 - COG2057I
## 933 2322778..2324100 + 440 16130160 atoE b2223 - COG2031I
## 935 2325389..2326165 - 258 16130162 yfaP b2225 - COG4676S
## 937 2332358..2332981 - 207 90111404 yfaT b2229 - COG3234S
## 943 2345406..2346536 + 376 16130170 nrdB b2235 - COG0208F
## 946 2347957..2349033 - 358 16130174 glpQ b2239 - COG0584C
## 948 2350669..2352297 + 542 16130176 glpA b2241 - COG0578C
## 949 2352287..2353546 + 419 16130177 glpB b2242 - COG3075E
## 951 2354926..2355825 + 299 16130179 yfaD b2244 - COG5464S
## 953 2356064..2356867 - 267 16130180 rhmA b2245 - COG3836G
## 955 2358231..2359436 - 401 226524733 rhmD b2247 - COG4948MR
## 962 2368040..2368930 + 296 16130191 arnD b2256 - COG0726G
## 963 2368930..2370582 + 550 16130192 arnT b2257 - COG1807M
## 964 2370579..2370914 + 111 94541119 arnE b4544 - -
## 967 2371670..2373025 - 451 16130195 menE b2260 - COG0318IQ
## 968 2373022..2373984 - 320 16130196 menC b2261 - COG1441H
## 969 2373984..2374841 - 285 16130197 menB b2262 - COG0447H
## 970 2374856..2375614 - 252 16130198 menH b2263 - COG0596R
## 983 2388070..2389527 - 485 145698289 nuoN b2276 - COG1007C
## 985 2391227..2393068 - 613 16130213 nuoL b2278 - COG1009CP
## 986 2393065..2393367 - 100 16130214 nuoK b2279 - COG0713C
## 987 2393364..2393918 - 184 16130215 nuoJ b2280 - COG0839C
## 988 2393930..2394472 - 180 16130216 nuoI b2281 - COG1143C
## 989 2394487..2395464 - 325 16130217 nuoH b2282 - COG1005C
## 991 2398240..2399577 - 445 16130219 nuoF b2284 - COG1894C
## 992 2399574..2400074 - 166 16130220 nuoE b2285 - COG1905C
## 994 2401973..2402635 - 220 16130222 nuoB b2287 - COG0377C
## 1001 2421758..2422531 - 257 16130241 hisP b2306 - COG4598E
## 1002 2422539..2423255 - 238 16130242 hisM b2307 - COG4160E
## 1007 2426743..2428260 - 505 16130247 purF b2312 - COG0034F
## 1009 2429044..2429706 - 220 90111417 dedD b2314 - COG3147S
## 1013 2432846..2433658 - 270 16130253 truA b2318 - COG0101J
## 1020 2441913..2442191 - 92 16130260 yfcL b2325 - -
## 1021 2442225..2442773 - 182 16130261 yfcM b2326 - COG3101S
## 1022 2442773..2443582 - 269 16130262 yfcA b2327 - COG0730R
## 1023 2443582..2444406 - 274 16130263 mepA b2328 - COG3770M
## 1024 2444410..2445495 - 361 16130264 aroC b2329 - COG0082E
## 1027 2447250..2448071 - 273 90111420 yfcO b2332 - -
## 1028 2448073..2448612 - 179 16130268 yfcP b2333 - COG3539NU
## 1029 2448609..2449097 - 162 16130269 yfcQ b2334 - COG3539NU
## 1030 2449094..2449606 - 170 16130270 yfcR b2335 - COG3539NU
## 1034 2455037..2457181 - 714 16130274 fadJ b2341 - COG1250I
## 1042 2465877..2466239 + 120 16130282 gtrA b2350 - COG2246S
## 1043 2466236..2467156 + 306 16130283 gtrB b2351 - COG0463M
## 1049 2473006..2473542 + 178 90111424 yfdR b2361 - COG1896R
## 1050 2473533..2473895 + 120 16130294 yfdS b2362 - -
## 1054 2475869..2477206 + 445 16130297 dsdX b2365 - COG2610GE
## 1056 2478660..2480198 - 512 16130299 emrY b2367 - COG2814G
## 1058 2481777..2482391 + 204 16130301 evgA b2369 - COG2197TK
## 1070 2496693..2498390 + 565 16130312 ypdA b2380 - COG3275T
## 1071 2498405..2499139 + 244 16130313 ypdB b2381 - COG3279KT
## 1073 2500012..2502507 - 831 16130315 fryA b2383 - COG1080G
## 1074 2502532..2503569 - 345 16130316 ypdE b2384 - COG1363G
## 1075 2503569..2504654 - 361 16130317 ypdF b2385 - COG0006E
## 1076 2504669..2505916 - 415 16130318 fryC b2386 - COG1299G
## 1085 2516489..2516833 + 114 90111429 yfeC b2398 - -
## 1094 2525963..2526181 - 72 94541121 ypeB b4546 - COG3530S
## 1099 2531786..2532043 + 85 16130341 ptsH b2415 - COG1925G
## 1100 2532088..2533815 + 575 16130342 ptsI b2416 - COG1080G
## 1103 2535364..2535738 + 124 16130345 yfeK b2419 - COG0173J
## 1106 2537739..2538836 - 365 16130348 cysA b2422 - COG1118P
## 1107 2538826..2539701 - 291 90111430 cysW b2423 - COG4208P
## 1108 2539701..2540534 - 277 16130349 cysU b2424 - COG0555O
## 1112 2543795..2544691 + 298 16130353 murQ b2428 - COG2103R
## 1113 2544695..2546119 + 474 16130354 murP b2429 - COG1263G
## 1117 2549299..2549748 - 149 90111434 yfeZ b2433 - -
## 1119 2550374..2551243 + 289 16130360 amiA b2435 - COG0860M
## 1121 2552152..2553204 - 350 16130362 eutR b2437 - COG2207K
## 1122 2553250..2553750 - 166 90111436 eutK b2438 - COG4577QC
## 1123 2553763..2554422 - 219 16130364 eutL b2439 - COG4816E
## 1124 2554432..2555319 - 295 16130365 eutC b2440 - COG4302E
## 1128 2559390..2559635 + 81 16130369 yffM b2444 - -
## 1130 2560133..2560549 + 138 16130371 yffO b2446 - -
## 1132 2561614..2561991 + 125 145698297 yffQ b2448 - -
## 1135 2563503..2564906 - 467 16130376 eutA b2451 - COG4819E
## 1137 2566346..2567533 - 395 90111438 eutG b2453 - COG1454C
## 1138 2567523..2568359 - 278 16130379 eutJ b2454 - COG4820E
## 1139 2568370..2569773 - 467 16130380 eutE b2455 - COG1012C
## 1141 2570179..2570472 - 97 90111439 eutM b2457 - COG4577QC
## 1142 2570511..2571527 - 338 16130383 eutD b2458 - COG0280C
## 1143 2571524..2572327 - 267 16130384 eutT b2459 - COG4812E
## 1144 2572324..2573025 - 233 16130385 eutQ b2460 - COG4766E
## 1145 2573000..2573479 - 159 16130386 eutP b2461 - COG4917E
## 1148 2576688..2577638 + 316 16130389 talA b2464 - COG0176G
## 1156 2589269..2589625 + 118 16130396 yffB b2471 - COG1393P
## 1157 2589629..2590756 + 375 16130397 dapE b2472 - COG0624E
## 1160 2591866..2593881 - 671 16130399 tmcA b2474 - COG1444R
## 1163 2595853..2596887 - 344 90111442 bamC b2477 - COG3317M
## 1165 2597928..2598500 + 190 90111443 gcvR b2479 - COG2716E
## 1167 2599223..2599840 + 205 90111444 hyfA b2481 - COG1142C
## 1168 2599840..2601858 + 672 16130407 hyfB b2482 - COG0651CP
## 1169 2601869..2602816 + 315 90111445 hyfC b2483 - COG0650C
## 1170 2602833..2604272 + 479 16130409 hyfD b2484 - COG1009CP
## 1171 2604284..2604934 + 216 16130410 hyfE b2485 - COG4237C
## 1172 2604939..2606519 + 526 16130411 hyfF b2486 - COG0651CP
## 1173 2606509..2608176 + 555 16130412 hyfG b2487 - COG3261C
## 1174 2608186..2608731 + 181 16130413 hyfH b2488 - COG1143C
## 1175 2608728..2609486 + 252 16130414 hyfI b2489 - COG3260C
## 1176 2609479..2609892 + 137 90111446 hyfJ b2490 - -
## 1177 2609922..2611934 + 670 90111447 hyfR b2491 - COG3604KT
## 1180 2614116..2615579 + 487 16130419 yfgC b2494 - COG4783R
## 1185 2619219..2620256 + 345 16130424 purM b2499 - COG0150F
## 1187 2621066..2623132 + 688 16130426 ppk b2501 - COG0855P
## 1191 2627814..2628332 + 172 16130430 yfgH b2505 - COG3133M
## 1198 2635496..2636674 - 392 16130437 bamB b2512 - COG1520S
## 1199 2636685..2637305 - 206 16130438 yfgM b2513 - COG2976S
## 1201 2638708..2639826 - 372 16130440 ispG b2515 - COG0821I
## 1205 2699763..2700491 - 242 16130490 recO b2565 - COG1381L
## 1206 2700503..2701408 - 301 16130491 era b2566 - COG1159R
## 1208 2702357..2703331 - 324 16130493 lepB b2568 - COG0681U
## 1210 2705344..2705823 - 159 16130495 rseC b2570 - COG3086T
## 1211 2705820..2706776 - 318 16130496 rseB b2571 - COG3026T
## 1212 2706776..2707426 - 216 16130497 rseA b2572 - COG3073T
## 1223 2717245..2717943 + 232 90111463 yfiP b2583 - COG3148S
## 1225 2720749..2722104 + 451 90111464 pssA b2585 - COG1502I
## 1229 2732325..2733056 - 243 16130514 yfiH b2593 - COG1496S
## 1235 2736970..2738091 - 373 16130521 tyrA b2600 - COG0287E
## 1238 2739897..2740415 + 172 16130524 yfiR b2603 - -
## 1239 2740405..2741631 + 408 16130525 yfiN b2604 - COG2199T
## 1241 2742205..2742552 - 115 16130527 rplS b2606 - COG0335J
## 1242 2742594..2743361 - 255 16130528 trmD b2607 - COG0336J
## 1243 2743392..2743940 - 182 90111466 rimM b2608 - COG0806J
## 1246 2745984..2746775 + 263 145698303 ypjD b2611 - COG4137R
## 1252 2752030..2752320 - 96 90111469 ratB b2618 - COG2914S
## 1260 2759373..2761562 - 729 16130545 yfjK b2627 - COG1204R
## 1263 2763940..2765013 + 357 16130548 rnlA b2630 - -
## 1267 2767725..2768426 + 233 16130552 yfjR b2634 - COG2378K
## 1268 2768467..2768703 + 78 90111471 ypjK b2635 - -
## 1269 2768703..2769146 + 147 90111472 yfjS b2636 - COG2378K
## 1272 2773941..2774399 + 152 16130558 yfjX b2643 - -
## 1273 2774408..2774890 + 160 16130559 yfjY b2644 - COG2003L
## 1274 2774899..2775099 + 66 94541123 ypjJ b4548 - -
## 1275 2775137..2775454 + 105 16130560 yfjZ b2645 - -
## 1278 2787007..2787984 + 325 90111476 csiD b2659 - -
## 1279 2788004..2789272 + 422 90111477 lhgO b2660 - COG0579R
## 1280 2789295..2790743 + 482 16130575 gabD b2661 - COG1012C
## 1282 2792275..2793675 + 466 16130577 gabP b2663 - COG1113E
## 1286 2795233..2795532 + 99 16130581 ygaV b2667 - COG0640K
## 1292 2798745..2798990 + 81 16130587 nrdH b2673 - COG0695O
## 1293 2798987..2799397 + 136 16130588 nrdI b2674 - COG1780F
## 1294 2799370..2801514 + 714 16130589 nrdE b2675 - COG0209F
## 1296 2802837..2804039 + 400 16130591 proV b2677 - COG4175E
## 1299 2807639..2808376 + 245 16130594 ygaZ b2682 - COG1296E
## 1302 2809449..2810621 + 390 16130597 emrA b2685 - COG1566V
## 1306 2814534..2814962 - 142 16130601 yqaA b2689 - COG1238S
## 1314 2823854..2824417 + 187 49176260 srlA b2702 - COG3730G
## 1315 2824414..2825373 + 319 49176261 srlE b2703 - COG3732G
## 1316 2825384..2825755 + 123 16130611 srlB b2704 - COG3731G
## 1319 2827069..2827842 + 257 16130614 srlR b2707 - COG1349KG
## 1322 2830498..2831937 + 479 16130617 norV b2710 - COG0426C
## 1327 2837546..2839003 + 485 49176263 ascF b2715 - COG1263G
## 1329 2840595..2841065 - 156 16130624 hycI b2717 - COG0680C
## 1330 2841058..2841468 - 136 16130625 hycH b2718 - -
## 1331 2841465..2842232 - 255 16130626 hycG b2719 - COG3260C
## 1332 2842232..2842774 - 180 16130627 hycF b2720 - COG1143C
## 1333 2842784..2844493 - 569 16130628 hycE b2721 - COG3261C
## 1334 2844511..2845434 - 307 16130629 hycD b2722 - COG0650C
## 1335 2845437..2847263 - 608 16130630 hycC b2723 - COG0651CP
## 1338 2848669..2849019 + 116 16130633 hypA b2726 - COG0375R
## 1339 2849023..2849895 + 290 16130634 hypB b2727 - COG0378OK
## 1340 2849886..2850158 + 90 16130635 hypC b2728 - COG0298O
## 1341 2850158..2851279 + 373 16130636 hypD b2729 - COG0409O
## 1348 2859452..2860360 + 302 16130643 ygbJ b2736 - COG2084I
## 1350 2861615..2862253 + 212 16130645 ygbL b2738 - COG0235G
## 1355 2866915..2867541 - 208 16130650 pcm b2743 - COG2518O
## 1356 2867535..2868296 - 253 16130651 surE b2744 - COG0496R
## 1357 2868277..2869326 - 349 16130652 truD b2745 - COG0585S
## 1358 2869323..2869802 - 159 16130653 ispF b2746 - COG0245I
## 1359 2869802..2870512 - 236 16130654 ispD b2747 - COG1211I
## 1363 2939258..2939653 - 131 16130714 ygdD b2807 - COG2363S
## 1366 2941359..2942564 + 401 16130717 csdA b2810 - COG0520E
## 1372 2948657..2950483 - 608 16130723 recD b2819 - COG0507L
## 1373 2950483..2954025 - 1180 16130724 recB b2820 - COG1074L
## 1375 2957082..2960450 - 1122 16130726 recC b2822 - COG1330L
## 1376 2960463..2960786 - 107 16130727 ppdC b2823 - COG4967NU
## 1377 2960771..2961178 - 135 90111493 ygdB b2824 - -
## 1378 2961175..2961738 - 187 16130729 ppdB b2825 - COG4795U
## 1380 2962383..2963177 - 264 16130731 thyA b2827 - COG0207F
## 1382 2964210..2966456 - 748 16130733 ptsP b2829 - COG3605T
## 1388 2970691..2971884 - 397 16130739 lplT b2835 - -
## 1395 2980519..2981280 - 253 16130746 kduD b2842 - COG1028IQR
## 1400 2986524..2987333 + 269 16130751 yqeI b2847 - COG3710K
## 1402 2987841..2987921 - 26 226524744 yqeL b4683 - -
## 1407 2994394..2995299 - 301 16130763 insD b2860 - COG2801L
## 1410 2998367..3000625 + 752 16130768 xdhA b2866 - COG1529C
## 1411 3000636..3001514 + 292 16130769 xdhB b2867 - COG1319C
## 1417 3008050..3009435 + 461 90111504 hyuA b2873 - COG0044F
## 1419 3010636..3012261 - 541 16130777 yqeB b2875 - COG1975O
## 1422 3014082..3017180 + 1032 16130780 ygfK b2878 - COG0493ER
## 1424 3018562..3019341 + 259 16130782 ygfM b2880 - COG1319C
## 1426 3022373..3023773 + 466 90111507 xanQ b2882 - COG2233F
## 1427 3023788..3025107 + 439 16130785 guaD b2883 - COG0402FR
## 1429 3026546..3027034 - 162 90111508 ygfS b2886 - COG1142C
## 1431 3029389..3030837 + 482 90111510 ygfU b2888 - COG2233F
## 1434 3031679..3033196 - 505 16130792 lysS b2890 - COG1190J
## 1436 3034395..3036128 - 577 16130794 recJ b2892 - COG0608L
## 1437 3036134..3036844 - 236 16130795 dsbC b2893 - COG1651O
## 1440 3038438..3038845 - 135 16130798 ygfX b2896 - -
## 1448 3047182..3047571 - 129 16130806 gcvH b2904 - COG0509E
## 1450 3049137..3050339 - 400 16130808 visC b2906 - COG0654HC
## 1451 3050362..3051540 - 392 16130809 ubiH b2907 - COG0654HC
## 1452 3051537..3052862 - 441 16130810 pepP b2908 - COG0006E
## 1460 3058872..3061016 + 714 16130818 scpA b2917 - COG1884I
## 1461 3061009..3062004 + 331 16130819 argK b2918 - COG1703E
## 1462 3062015..3062800 + 261 90111512 scpB b2919 - COG1024I
## 1471 3071998..3072711 - 237 16130829 yggC b2928 - COG1072H
## 1472 3072708..3073217 - 169 16130830 yggD b2929 - COG3722K
## 1473 3073239..3074204 - 321 16130831 yggF b2930 - COG1494G
## 1474 3074201..3075478 - 425 49176285 yggP b4465 - COG1063ER
## 1475 3075493..3076881 - 462 16130834 cmtA b2933 - COG2213G
## 1480 3081957..3083933 - 658 16130839 speA b2938 - COG1166E
## 1487 3089156..3089887 + 243 90111515 rsmE b2946 - COG1385S
## 1489 3090959..3091522 + 187 90111516 yqgE b2948 - COG1678K
## 1495 3291422..3293458 + 678 16131039 lpoA b3147 - COG3107R
## 1496 3293416..3293811 + 131 16131040 yraN b3148 - COG0792L
## 1497 3293831..3294421 + 196 16131041 diaA b3149 - COG0279G
## 1504 3298277..3298780 - 167 16131048 yhbS b3156 - COG3153R
## 1506 3299507..3300502 + 331 16131050 yhbU b3158 - COG0826O
## 1510 3303993..3305882 - 629 90111550 deaD b3162 - COG0513LKJ
## 1515 3309855..3310799 - 314 16131058 truB b3166 - COG0130J
## 1517 3311364..3314036 - 890 16131060 infB b3168 - COG0532J
## 1518 3314061..3315548 - 495 16131061 nusA b3169 - COG0195K
## 1523 3320755..3322092 - 445 16131066 glmM b3176 - COG1109G
## 1529 3557870..3558628 - 252 16131297 glpR b3423 - COG1349KG
## 1530 3558645..3559475 - 276 49176353 glpG b3424 - COG0705R
## 1533 3562157..3564604 - 815 16131302 glgP b3428 - COG0058G
## 1534 3564623..3566056 - 477 16131303 glgA b3429 - COG0297G
## 1535 3566056..3567351 - 431 16131304 glgC b3430 - COG0448G
## 1536 3567369..3569342 - 657 16131305 glgX b3431 - COG1523G
## 1540 3573744..3575084 - 446 49176355 gntU b4476 - COG2610GE
## 1547 3581506..3581781 + 91 16131316 insA b3444 - COG3677L
## 1553 3585393..3586136 - 247 16131321 ugpQ b3449 - COG0584C
## 1554 3586133..3587203 - 356 90111593 ugpC b3450 - COG3839G
## 1555 3587205..3588050 - 281 16131323 ugpE b3451 - COG0395G
## 1558 3590747..3591460 - 237 90111594 livF b3454 - COG0410E
## 1559 3591462..3592229 - 255 16131327 livG b3455 - COG0411E
## 1560 3592226..3593503 - 425 16131328 livM b3456 - COG4177E
## 1561 3593500..3594426 - 308 16131329 livH b3457 - COG0559E
## 1566 3599051..3600109 - 352 16131334 ftsX b3462 - COG2177D
## 1567 3600102..3600770 - 222 16131335 ftsE b3463 - COG2884D
## 1569 3602416..3603012 + 198 16131337 rsmD b3465 - COG0742L
## 1580 3611690..3613264 + 524 16131348 nikA b3476 - COG0747E
## 1581 3613264..3614208 + 314 16131349 nikB b3477 - COG0601EP
## 1582 3614205..3615038 + 277 16131350 nikC b3478 - COG1173EP
## 1583 3615038..3615802 + 254 16131351 nikD b3479 - COG0444EP
## 1584 3615799..3616605 + 268 16131352 nikE b3480 - COG1124EP
## 1586 3617215..3621450 + 1411 49176361 rhsB b3482 - COG3209M
## 1589 3623702..3624826 - 374 226524752 yhhJ b3485 - COG0842V
## 1590 3624826..3627561 - 911 49176363 rbbA b3486 - COG1131V
## 1599 3640403..3641155 - 250 16131369 yhiQ b3497 - -
## 1605 3646958..3648247 + 429 90111602 arsB b3502 - COG1055P
## 1615 3657255..3658412 + 385 16131385 mdtE b3513 - COG0845M
## 1623 3670437..3671336 + 299 145698322 yhjC b3521 - COG0583K
## 1632 3683723..3687196 - 1157 226524756 bcsC b3530 - COG5010U
## 1633 3687178..3688284 - 368 16131403 bcsZ b3531 - COG3405G
## 1634 3688291..3690630 - 779 16131404 bcsB b3532 - -
## 1637 3694481..3696052 + 523 16131408 bcsE b3536 - -
## 1638 3696049..3696240 + 63 90111610 bcsF b3537 - -
## 1642 3699887..3700891 - 334 16131412 dppF b3540 - COG4608E
## 1643 3700888..3701871 - 327 16131413 dppD b3541 - COG0444EP
## 1644 3701882..3702784 - 300 16131414 dppC b3542 - COG1173EP
## 1650 3711115..3711678 + 187 16131420 tag b3549 - COG2818L
## 1659 3718703..3719224 + 173 16131428 insJ b3557 - COG2963L
## 1661 3720351..3722420 - 689 16131430 glyS b3559 - COG0751J
## 1665 3724947..3725384 - 145 90111616 yiaA b3562 - COG4682S
## 1670 3730224..3731765 + 513 16131438 xylG b3567 - COG1129G
## 1678 3740756..3741754 + 332 16131446 yiaK b3575 - COG2055C
## 1680 3742351..3742824 + 157 16131448 yiaM b3577 - COG3090G
## 1681 3742827..3744104 + 425 49176375 yiaN b3578 - COG1593G
## 1682 3744117..3745103 + 328 16131450 yiaO b3579 - COG1638G
## 1683 3745107..3746603 + 498 16131451 lyxK b3580 - COG1070G
## 1684 3746600..3747262 + 220 16131452 yiaQ b3581 - COG0269G
## 1685 3747255..3748115 + 286 90111618 yiaR b3582 - COG3623G
## 1689 3750986..3752122 - 378 16131457 yiaV b3586 - COG1566V
## 1693 3756040..3757884 - 614 16131461 selB b3590 - COG3276J
## 1696 3760206..3764339 + 1377 16131464 rhsA b3593 - COG3209M
## 1699 3768266..3769402 - 378 16131468 yibH b3597 - COG1566V
## 1702 3772447..3773595 + 382 16131471 mtlD b3600 - COG0246G
## 1706 3775422..3777077 + 551 16131474 lldP b3603 - COG1620C
## 1707 3777077..3777853 + 258 16131475 lldR b3604 - COG2186K
## 1719 3820129..3820404 + 91 16131520 rpoZ b3649 - COG1758K
## 1725 3830242..3832560 - 772 16131527 yicI b3656 - COG1501G
## 1736 3845328..3846647 - 439 90111632 uhpC b3667 - COG2271G
## 1737 3846657..3848159 - 500 90111633 uhpB b3668 - COG3851T
## 1739 3848825..3849115 - 96 16131540 ilvN b3670 - COG0440E
## 1744 3853137..3853634 - 165 16131544 yidF b3674 - COG0641R
## 1745 3853631..3853993 - 120 16131545 yidG b3675 - -
## 1748 3854934..3856427 - 497 16131548 yidJ b3678 - COG3119P
## 1759 3869873..3871021 - 382 49176390 dgoD b4478 - COG4948MR
## 1760 3871018..3871635 - 205 49176391 dgoA b4477 - COG0800G
## 1761 3871619..3872497 - 292 16131561 dgoK b3693 - COG3734G
## 1766 3875728..3878142 - 804 49176395 gyrB b3699 - COG0187L
## 1767 3878171..3879244 - 357 16131568 recF b3700 - COG1195L
## 1768 3879244..3880344 - 366 16131569 dnaN b3701 - COG0592L
## 1770 3882359..3882499 + 46 16131571 rpmH b3703 - COG0230J
## 1771 3882516..3882875 + 119 16131572 rnpA b3704 - COG0594J
## 1772 3882839..3883096 + 85 94541129 yidD b4557 - COG0759S
## 1778 3889638..3890813 + 391 16131578 mdtL b3710 - COG2814G
## 1780 3891904..3892653 + 249 226524759 yieE b3712 - COG2091H
## 1784 3895529..3895996 + 155 16131584 cbrB b3716 - -
## 1786 3896694..3897416 - 240 49176397 yieK b3718 - COG0363G
## 1787 3897431..3898600 - 389 145698330 yieL b3719 - COG2382P
## 1789 3900312..3901724 - 470 16131589 bglB b3721 - COG2723G
## 1792 3904876..3905601 - 241 16131592 phoU b3724 - COG0704P
## 1794 3906572..3907462 - 296 16131594 pstA b3726 - COG0581P
## 1799 3913576..3913995 - 139 16131599 atpC b3731 - COG0355C
## 1800 3914016..3915398 - 460 16131600 atpD b3732 - COG0055C
## 1802 3916339..3917880 - 513 16131602 atpA b3734 - COG0056C
## 1803 3917893..3918426 - 177 16131603 atpH b3735 - COG0712C
## 1805 3918973..3919212 - 79 16131605 atpE b3737 - COG0636C
## 1806 3919259..3920074 - 271 16131606 atpB b3738 - COG0356C
## 1813 3926175..3927626 - 483 49176398 viaA b3745 - COG2425R
## 1816 3931374..3931793 + 139 90111647 rbsD b3748 - COG1869G
## 1817 3931801..3933306 + 501 16131617 rbsA b3749 - COG1129G
## 1818 3933311..3934276 + 321 16131618 rbsC b3750 - COG1172G
## 1820 3935317..3936246 + 309 16131620 rbsK b3752 - COG0524G
## 1822 3937208..3938635 - 475 16131622 hsrA b3754 - COG2814G
## 1829 3950224..3950487 + 87 16131627 ilvM b3769 - COG3978S
## 1831 3951501..3953351 + 616 49176404 ilvD b3771 - COG0129EG
## 1841 3965939..3967042 + 367 16131640 rfe b3784 - COG0472M
## 1843 3968156..3969286 + 376 49176409 rffE b3786 - COG0381M
## 1844 3969283..3970545 + 420 49176410 rffD b3787 - COG0677M
## 1845 3970545..3971612 + 355 49176411 rffG b3788 - COG1088M
## 1846 3971631..3972512 + 293 16131645 rffH b3789 - COG1209M
## 1847 3972490..3973164 + 224 145698332 rffC b3790 - -
## 1848 3973169..3974299 + 376 16131647 rffA b3791 - COG0399M
## 1849 3974301..3975551 + 416 16131648 wzxE b3792 - -
## 1850 3975548..3976627 + 359 49176413 rffT b4481 - -
## 1851 3976624..3977976 + 450 16131649 wzyE b3793 - -
## 1856 3984709..3985905 - 398 16131654 hemY b3802 - COG3071H
## 1857 3985908..3987089 - 393 16131655 hemX b3803 - COG2959H
## 1858 3987111..3987851 - 246 16131656 hemD b3804 - COG1587H
## 1862 3992545..3992748 + 67 94541130 yifL b4558 - COG5567N
## 1863 3992785..3993609 + 274 90111650 dapF b3809 - COG0253E
## 1864 3993606..3994313 + 235 16131662 yigA b3810 - COG3159S
## 1865 3994310..3995206 + 298 16131663 xerC b3811 - COG4973L
## 1870 4000442..4000822 - 126 16131667 yigF b3817 - -
## 1878 4007193..4008215 + 340 49176423 pldB b3825 - COG2267I
## 1886 4016878..4017633 + 251 49176426 ubiE b3833 - COG2226H
## 1887 4017647..4018252 + 201 16131683 yigP b3834 - COG3165S
## 1889 4019968..4020237 + 89 90111653 tatA b3836 - COG1826U
## 1890 4020241..4020756 + 171 49176428 tatB b3838 - COG1826U
## 1891 4020759..4021535 + 258 16131687 tatC b3839 - COG0805U
## 1894 4023011..4024504 + 497 16131689 ubiD b3843 - COG0043H
## 1896 4025632..4026795 - 387 49176430 fadA b3845 - COG0183I
## 1898 4029184..4030515 + 443 16131693 pepQ b3847 - COG0006E
## 1899 4030515..4031129 + 204 90111654 yigZ b3848 - COG1739S
## 1900 4031168..4032619 + 483 49176432 trkH b3849 - COG0168P
## 1902 4038929..4039456 - 175 145698333 mobB b3856 - COG1763H
## 1905 4040438..4041424 + 328 16131700 rdoA b3859 - COG2334R
## 1914 4051892..4053301 - 469 16131708 glnG b3868 - COG2204T
## 1918 4058470..4059180 + 236 16131712 yihL b3872 - COG2188K
## 1922 4062386..4063789 - 467 49176435 yihO b3876 - COG2211G
## 1923 4063832..4065217 - 461 145698335 yihP b3877 - COG2211G
## 1926 4068538..4069779 - 413 90111658 yihS b3880 - COG2942G
## 1927 4069796..4070674 - 292 16131721 yihT b3881 - COG3684G
## 1929 4071762..4072658 + 298 90111659 yihV b3883 - COG0524G
## 1931 4073576..4074175 + 199 90111661 yihX b3885 - COG1011R
## 1932 4074169..4075041 + 290 16131726 yihY b3886 - COG1295S
## 1933 4075038..4075475 + 145 16131727 dtd b3887 - COG1490J
## 1937 4078322..4079251 - 309 16131731 fdhE b3891 - COG3058O
## 1938 4079248..4079883 - 211 16131732 fdoI b3892 - COG2864C
## 1939 4079880..4080782 - 300 16131733 fdoH b3893 - COG0437C
## 1943 4086130..4087878 - 582 16131737 frvR b3897 - COG3711K
## 1944 4087878..4088948 - 356 16131738 frvX b3898 - COG1363G
## 1945 4088938..4090389 - 483 90111664 frvB b3899 - COG1299G
## 1947 4091147..4091461 - 104 16131741 rhaM b3901 - COG3254S
## 1949 4092746..4094005 - 419 49176441 rhaA b3903 - COG4806G
## 1957 4101625..4102998 - 457 16131751 cpxA b3911 - COG0642T
## 1967 4110990..4111289 + 99 16131760 yiiS b3922 - COG3691S
## 1971 4113737..4115245 - 502 16131764 glpK b3926 - COG0554C
## 1976 4118439..4119770 - 443 16131769 hslU b3931 - COG1220O
## 1983 4175381..4175764 + 127 16131811 secE b3981 - COG0690U
## 1985 4176470..4176898 + 142 16131813 rplK b3983 - COG0080J
## 1992 4188758..4189891 - 377 16131820 thiH b3990 - COG1060HR
## 1993 4189888..4190658 - 256 33347812 thiG b3991 - COG2022H
## 1994 4190660..4190860 - 66 49176448 thiS b4407 - COG2104H
## 1995 4190844..4191599 - 251 90111672 thiF b3992 - COG0476H
## 1996 4191592..4192227 - 211 16131823 thiE b3993 - COG0352H
## 1999 4194926..4195699 + 257 49176450 nudC b3996 - COG2816L
## 2000 4195739..4196803 + 354 16131827 hemE b3997 - COG0407H
## 2001 4196813..4197484 + 223 90111673 nfi b3998 - COG1515L
## 2003 4198304..4198576 + 90 16131830 hupA b4000 - COG0776L
## 2006 4199949..4201346 + 465 16131833 zraS b4003 - COG0642T
## 2008 4202665..4203954 - 429 16131835 purD b4005 - COG0151F
## 2013 4213501..4215102 + 533 16131840 aceB b4014 - COG2225C
## 2026 4234285..4234923 + 212 90111676 yjbF b4027 - -
## 2027 4234920..4235657 + 245 16131854 yjbG b4028 - -
## 2032 4240649..4241539 - 296 16131858 malG b4032 - COG3833G
## 2038 4250529..4251026 + 165 90111677 ubiC b4039 - COG3161H
## 2042 4255138..4255746 + 202 16131869 lexA b4043 - COG1974KT
## 2046 4258344..4258598 + 84 16131873 yjbL b4047 - -
## 2056 4268261..4268677 + 138 16131882 yjbQ b4056 - COG0432S
## 2067 4281276..4282925 - 549 16131893 actP b4067 - COG4147R
## 2070 4285787..4287223 + 478 16131896 nrfA b4070 - COG3303P
## 2071 4287268..4287834 + 188 90111682 nrfB b4071 - COG3303P
## 2072 4287831..4288502 + 223 16131898 nrfC b4072 - COG0437C
## 2074 4289535..4291193 + 552 16131900 nrfE b4074 - COG1138O
## 2075 4291186..4291569 + 127 16131901 nrfF b4075 - COG3088O
## 2080 4297587..4299053 - 488 16131906 mdtP b4080 - COG1538MU
## 2081 4299050..4301101 - 683 90111683 mdtO b4081 - COG1289S
## 2082 4301101..4302132 - 343 16131908 mdtN b4082 - COG1566V
## 2085 4304893..4305822 - 309 16131910 alsK b4084 - COG1940KG
## 2086 4305806..4306501 - 231 16131911 alsE b4085 - COG0036G
## 2087 4306512..4307492 - 326 16131912 alsC b4086 - COG1172G
## 2093 4312367..4313125 - 252 16131918 phnP b4092 - COG1235R
## 2094 4313127..4313561 - 144 16131919 phnO b4093 - COG1246E
## 2095 4313548..4314105 - 185 16131920 phnN b4094 - COG3709P
## 2096 4314105..4315241 - 378 16131921 phnM b4095 - COG3454P
## 2098 4316029..4316787 - 252 49176459 phnK b4097 - COG4107P
## 2099 4316784..4317629 - 281 16131924 phnJ b4098 - COG3627P
## 2100 4317622..4318686 - 354 16131925 phnI b4099 - COG3626P
## 2101 4318686..4319270 - 194 16131926 phnH b4100 - COG3625P
## 2102 4319267..4319719 - 150 16131927 phnG b4101 - COG3624P
## 2104 4321359..4322375 - 338 16131931 phnD b4105 - COG3221P
## 2108 4325158..4327386 + 742 16131935 yjdA b4109 - COG1160R
## 2112 4330204..4331295 - 363 16131938 basS b4112 - COG0642T
## 2113 4331305..4331973 - 222 16131939 basR b4113 - COG0745TK
## 2124 4347338..4348057 - 239 16131950 dcuR b4124 - COG4565KT
## 2126 4349866..4350096 + 76 16131952 yjdI b4126 - COG3592S
## 2128 4350607..4350903 + 98 16131954 yjdK b4128 - -
## 2135 4360756..4361331 - 191 90111689 yjdC b4135 - COG1309K
## 2136 4361368..4363065 - 565 16131961 dsbD b4136 - COG4232OC
## 2142 4368711..4369004 + 97 16131967 groS b4142 - COG0234O
## 2153 4377030..4377389 - 119 16131976 frdD b4151 - COG3080C
## 2154 4377400..4377795 - 131 16131977 frdC b4152 - COG3029C
## 2155 4377806..4378540 - 244 16131978 frdB b4153 - COG0479C
## 2159 4383416..4383730 + 104 16131982 yjeN b4157 - -
## 2161 4384070..4387393 - 1107 16131984 yjeP b4159 - COG3264M
## 2167 4392089..4393636 + 515 16131989 yjeF b4167 - COG0063G
## 2168 4393608..4394069 + 153 16131990 yjeE b4168 - COG0802R
## 2169 4394088..4395425 + 445 16131991 amiB b4169 - COG0860M
## 2170 4395435..4397282 + 615 16131992 mutL b4170 - COG0323L
## 2174 4400061..4401320 + 419 16131996 hflK b4174 - COG0330O
## 2178 4404213..4404638 + 141 16132000 nsrR b4178 - COG1959K
## 2181 4408156..4408557 + 133 16132003 yjfI b4181 - COG3789S
## 2183 4409325..4409984 + 219 16132005 yjfK b4183 - -
## 2184 4410002..4410400 + 132 16132006 yjfL b4184 - COG3766S
## 2185 4410410..4411048 + 212 16132007 yjfM b4185 - COG5463S
## 2193 4418003..4419400 + 465 90111703 ulaA b4193 - COG3037S
## 2194 4419416..4419721 + 101 16132016 ulaB b4194 - COG3414G
## 2195 4419731..4420195 + 154 16132017 ulaC b4195 - COG1762GT
## 2196 4420209..4420859 + 216 16132018 ulaD b4196 - COG0269G
## 2197 4420869..4421723 + 284 16132019 ulaE b4197 - COG3623G
## 2200 4423141..4423536 + 131 296044035 rpsF b4200 - COG0360J
## 2201 4423543..4423857 + 104 16132023 priB b4201 - COG2965L
## 2202 4423862..4424089 + 75 16132024 rpsR b4202 - COG0238J
## 2218 4440405..4442138 + 577 16132042 ytfM b4220 - COG0729M
## 2219 4442135..4445914 + 1259 16132043 ytfN b4221 - COG2911S
## 2221 4446470..4446721 + 83 90111708 chpS b4224 - COG2336T
## 2225 4449081..4450583 + 500 49176475 ytfR b4485 - COG1129G
## 2226 4450594..4451619 + 341 145698343 ytfT b4230 - COG1172G
## 2240 4469009..4469470 - 153 16132066 pyrI b4244 - COG1781F
## 2241 4469483..4470418 - 311 16132067 pyrB b4245 - COG0540F
## 2252 4479005..4481860 - 951 16132080 valS b4258 - COG0525J
## 2255 4484241..4485341 + 366 16132083 lptF b4261 - COG0795R
## 2260 4490610..4491374 - 254 16132088 idnO b4266 - COG1028IQR
## 2264 4496295..4496660 + 121 145698344 insC b4272 - COG2963L
## 2268 4502081..4503298 + 405 90111718 yjhB b4279 - COG2814G
## 2269 4503310..4504428 + 372 90111719 yjhC b4280 - COG0673R
## 2272 4508713..4509480 - 255 16132108 fecE b4287 - COG1120PH
## 2273 4509481..4510437 - 318 16132109 fecD b4288 - COG0609P
## 2274 4510434..4511432 - 332 16132110 fecC b4289 - COG0609P
## 2275 4511429..4512331 - 300 162135917 fecB b4290 - COG4594P
## 2277 4514787..4515740 - 317 16132113 fecR b4292 - COG3712PT
## 2282 4520150..4522117 - 655 16132118 yjhG b4297 - COG0129EG
## 2283 4522128..4523033 - 301 90111725 yjhH b4298 - COG0329EM
## 2285 4524129..4524911 - 260 16132121 sgcR b4300 - COG1349KG
## 2286 4524928..4525560 - 210 16132122 sgcE b4301 - COG0036G
## 2288 4526134..4526940 - 268 16132124 sgcQ b4303 - COG0434R
## 2289 4526953..4528266 - 437 16132125 sgcC b4304 - COG3775G
## 2290 4528278..4528556 - 92 94541133 sgcB b4565 - COG3414G
## 2293 4531262..4531807 - 181 16132128 yjhQ b4307 - COG3153R
## 2296 4535682..4536788 - 368 90111727 nanM b4310 - COG3055S
## 2301 4541751..4542290 + 179 90111729 fimI b4315 - COG3539NU
## 2303 4543119..4545755 + 878 16132138 fimD b4317 - COG3188NU
## 2304 4545765..4546295 + 176 16132139 fimF b4318 - COG3539NU
## 2305 4546308..4546811 + 167 16132140 fimG b4319 - COG3539NU
## 2314 4556377..4557549 - 390 16132149 iadA b4328 - COG0044F
## 2315 4557562..4558023 - 153 16132150 yjiG b4329 - COG0700S
## Product
## 2 fused aspartokinase I and homoserine dehydrogenase I
## 3 homoserine kinase
## 11 conserved protein, UPF0174 family
## 16 regulatory protein for HokC, overlaps CDS of hokC
## 20 IS1 transposase B
## 23 predicted protein
## 24 bifunctional riboflavin kinase/FAD synthetase
## 25 isoleucyl-tRNA synthetase
## 27 FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)
## 31 carbamoyl phosphate synthetase small subunit, glutamine amidotransferase
## 34 stimulator of CaiD and CaiB enzyme activities
## 38 crotonobetaine reductase subunit II, FAD-binding
## 40 predicted electron transfer flavoprotein subunit, required for anaerobic carnitine reduction
## 42 predicted oxidoreductase with FAD/NAD(P)-binding domain
## 45 potassium-efflux system ancillary protein for KefC, glutathione-regulated; quinone oxidoreductase, FMN-dependent
## 48 diadenosine tetraphosphatase
## 49 protein associated with Co2+ and Mg2+ efflux
## 50 16S rRNA dimethyladenosine transferase, SAM-dependent
## 51 4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent
## 55 pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32)
## 59 L-arabinose isomerase
## 63 thiamin transporter subunit
## 64 fused thiamin transporter subunits of ABC superfamily: membrane components
## 69 3-isopropylmalate dehydratase small subunit
## 70 3-isopropylmalate dehydratase large subunit
## 71 3-isopropylmalate dehydrogenase, NAD(+)-dependent
## 75 acetolactate synthase III, large subunit
## 78 RsmH methytransferase inhibitor
## 79 16S rRNA m(4)C1402 methyltranserfase, SAM-dependent
## 80 membrane bound cell division protein at septum containing leucine zipper motif
## 81 transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3)
## 82 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:meso-diaminopimelate ligase
## 83 UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase
## 84 phospho-N-acetylmuramoyl-pentapeptide transferase
## 85 UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase
## 86 Lipid II flippase; integral membrane protein involved in stabilizing FstZ ring during cell division
## 88 UDP-N-acetylmuramate:L-alanine ligase
## 89 D-alanine:D-alanine ligase
## 90 Divisome assembly protein, membrane anchored protein involved in growth of wall at septum
## 97 DNA gyrase inhibitor
## 98 conserved protein
## 101 assembly protein in type IV pilin biogenesis, transmembrane protein
## 102 conserved protein with nucleoside triphosphate hydrolase domain
## 105 1,6-anhydro-N-acetylmuramyl-L-alanine amidase, Zn-dependent; murein amidase
## 109 pyruvate dehydrogenase, decarboxylase component E1, thiamin-binding
## 115 S-adenosylmethionine decarboxylase
## 122 predicted transporter subunit: ATP-binding component of ABC superfamily
## 128 pantothenate synthetase
## 131 predicted fimbrial-like adhesin protein
## 132 predicted fimbrial-like adhesin protein
## 133 predicted fimbrial-like adhesin protein
## 134 predicted outer membrane usher protein
## 137 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase
## 139 glutamyl-Q tRNA(Asp) synthetase
## 141 predicted DNA-binding transcriptional regulator
## 146 iron-hydroxamate transporter subunit
## 147 iron-hydroxamate transporter subunit
## 152 inner membrane protein, UPF0126 family
## 153 vitamin B12 transporter subunit: periplasmic-binding component of ABC superfamily
## 159 glutaminase
## 162 inner membrane protein that stimulates the ftsH htpX mutant suppressor activity of QmcA
## 164 predicted transporter subunit: ATP-binding component of ABC superfamily
## 167 predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain
## 169 predicted transporter subunit: ATP-binding component of ABC superfamily
## 171 rhsD element protein
## 177 glyoxylate carboligase
## 182 predicted uracil/xanthine transporter
## 184 conserved protein
## 185 allantoate amidohydrolase
## 188 conserved protein
## 190 N5-carboxyaminoimidazole ribonucleotide synthase
## 192 UDP-2,3-diacylglucosamine pyrophosphatase
## 196 Ribosome-associated protein; predicted RNA-binding protein
## 199 pilin chaperone, periplasmic
## 200 predicted outer membrane export usher protein
## 201 predicted fimbrial-like adhesin protein
## 205 IS3 transposase A
## 209 DLP12 prophage; secreted protein, UPF0098 family
## 211 hypothetical protein, DLP12 prophage
## 212 DLP12 prophage; predicted protein
## 213 DLP12 prophage; conserved protein
## 214 DLP12 prophage; predicted protein
## 215 DLP12 prophage; endonuclease RUS
## 219 DLP12 prophage; predicted phage lysis protein
## 220 DLP12 prophage; predicted lysozyme
## 221 DLP12 prophage; predicted murein endopeptidase
## 231 predicted protein
## 232 bacteriophage N4 receptor, outer membrane subunit
## 234 sensory histidine kinase in two-component regulatory system with CusR, senses copper ions
## 237 periplasmic copper- and silver-binding protein
## 238 copper/silver efflux system, membrane fusion protein
## 250 enterobactin/ferric enterobactin esterase
## 251 conserved protein
## 254 iron-enterobactin transporter subunit
## 255 iron-enterobactin transporter subunit
## 259 isochorismate synthase 1
## 260 2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex
## 261 isochorismatase
## 262 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase
## 268 conserved protein
## 280 nicotinic acid mononucleotide adenylyltransferase, NAD(P)-dependent
## 281 DNA polymerase III, delta subunit
## 282 LPS assembly OM complex LptDE, lipoprotein component
## 286 predicted protein
## 289 conserved protein, DUF1266 family
## 293 glutamate, aspartate ABC transporter ATP-binding subunit
## 294 glutamate, aspartate ABC transporter permease subunit
## 298 apolipoprotein N-acyltransferase
## 300 metal-binding heat shock protein required for rRNA maturation
## 305 UMP phosphatase
## 306 DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine
## 313 DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport
## 318 regulatory protein for replication initiation
## 321 putrescine/proton symporter: putrescine/ornithine antiporter
## 324 DNA-binding response regulator in two-component regulatory system with KdpD
## 325 fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein
## 326 potassium translocating ATPase, subunit C
## 327 potassium translocating ATPase, subunit B
## 328 potassium translocating ATPase, subunit A
## 331 rhsC element core protein RshC
## 335 conserved protein, DUF1722 family
## 338 conserved metal-binding protein, NIF3 family
## 339 predicted enzyme subunit
## 340 predicted enzyme subunit
## 341 conserved protein, UPF0271 family
## 344 predicted fimbrial-like adhesin protein
## 345 predicted periplasmic pilus chaperone
## 349 succinate dehydrogenase, membrane subunit, binds cytochrome b556
## 350 succinate dehydrogenase, membrane subunit, binds cytochrome b556
## 351 succinate dehydrogenase, flavoprotein subunit
## 353 2-oxoglutarate decarboxylase, thiamin-requiring
## 355 succinyl-CoA synthetase, beta subunit
## 358 fused 2-O-a-mannosyl-D-glycerate specific PTS enzymes: IIA component/IIB component/IIC component
## 360 cytochrome d terminal oxidase, subunit I
## 361 cytochrome d terminal oxidase, subunit II
## 362 conserved protein
## 364 acyl-CoA thioesterase, involved in phospholipid metabolism
## 365 membrane spanning protein in TolA-TolQ-TolR complex
## 368 periplasmic protein
## 369 peptidoglycan-associated outer membrane lipoprotein
## 371 quinolinate synthase, subunit A
## 377 galactose-1-epimerase (mutarotase)
## 378 galactokinase
## 379 galactose-1-phosphate uridylyltransferase
## 384 molybdate transporter subunit
## 385 molybdate transporter subunit
## 396 biotin synthase
## 397 8-amino-7-oxononanoate synthase
## 398 malonyl-CoA methyltransferase, SAM-dependent
## 402 molybdopterin biosynthesis protein A
## 403 molybdopterin biosynthesis protein B
## 404 molybdopterin biosynthesis, protein C
## 405 molybdopterin synthase, small subunit
## 409 conserved inner membrane protein
## 410 cardiolipin synthase 2
## 413 predicted transporter subunit: membrane component of ABC superfamily
## 414 predicted transporter subunit: membrane component of ABC superfamily
## 415 fused predicted transporter subunits of ABC superfamily: ATP-binding components
## 416 predicted membrane fusion protein (MFP) component of efflux pump, membrane anchor
## 420 ATP-dependent DNA helicase
## 425 conserved protein, Fe(II)-dependent oxygenase superfamily
## 430 glutamine transporter subunit
## 438 DNA-binding transcriptional regulator of mntH
## 444 predicted pyruvate formate lyase
## 447 molybdopterin synthase sulfurylase
## 449 Isoaspartyl peptidase
## 450 glutathione transporter ATP-binding protein, ABC superfamily
## 451 glutathione periplasmic binding protein, ABC superfamily transporter
## 452 glutathione transporter, permease component, ABC superfamily
## 454 predicted cyclic-di-GMP phosphodiesterase, inner membrane protein
## 465 FMN and erythrose-4-P phosphatase
## 471 conserved protein, DUF1418 family
## 476 putrescine transporter subunit: ATP-binding component of ABC superfamily
## 477 putrescine transporter subunit: membrane component of ABC superfamily
## 479 inner membrane protein, DUF2593 family
## 482 arginine transporter subunit
## 483 arginine transporter subunit
## 484 arginine transporter subunit
## 487 conserved protein, UPF0145 family
## 490 conserved protein with NAD(P)-binding Rossmann-fold domain
## 491 L-allo-threonine aldolase, PLP-dependent
## 493 HCP oxidoreductase, NADH-dependent
## 499 macrolide transporter subunit, membrane fusion protein (MFP) component
## 502 regulatory protein for ClpA substrate specificity
## 505 leucyl/phenylalanyl-tRNA-protein transferase
## 506 fused glutathione, cysteine exporter subunits of ABC superfamily: membrane component/ATP-binding component
## 511 chaperone for lipoproteins
## 514 dimethyl sulfoxide reductase, anaerobic, subunit A
## 515 dimethyl sulfoxide reductase, anaerobic, subunit B
## 533 inner membrane protein, ComEC family of competence proteins
## 534 fused lipid transporter subunits of ABC superfamily: membrane component/ATP-binding component
## 546 antimicrobial peptide transport ABC system ATP-binding protein
## 547 antimicrobial peptide transport ABC system ATP-binding protein
## 548 antimicrobial peptide transport ABC transporter permease
## 549 antimicrobial peptide transport ABC transporter permease
## 554 gamma-Glu-GABA hydrolase
## 556 gamma-Glu-gamma-aminobutyraldehyde dehydrogenase, NAD(P)H-dependent
## 557 gamma-Glu-putrescine oxidase, FAD/NAD(P)-binding
## 561 DNA-binding transcriptional regulator of psp operon
## 562 DNA-binding transcriptional activator
## 565 predicted glucosyltransferase
## 566 predicted sugar transporter subunit: periplasmic-binding component of ABC superfamily
## 567 predicted sugar transporter subunit: membrane component of ABC superfamily
## 568 predicted sugar transporter subunit: membrane component of ABC superfamily
## 569 predicted oxidoreductase, Zn-dependent and NAD(P)-binding
## 570 predicted enzyme
## 571 predicted oxidoreductase, NADH-binding
## 572 predicted hydrolase
## 576 conserved protein with nucleoside triphosphate hydrolase domain
## 590 O-6-alkylguanine-DNA:cysteine-protein methyltransferase
## 591 p-aminobenzoyl-glutamate transporter; membrane protein
## 592 p-aminobenzoyl-glutamate hydrolase, B subunit
## 600 Rac prophage; integrase
## 602 Rac prophage; predicted protein
## 604 Rac prophage; recombination and repair protein
## 607 Rac prophage; conserved protein
## 610 Rac prophage; predicted protein
## 613 Rac prophage; predicted DNA-binding transcriptional regulator
## 614 Rac prophage; predicted protein
## 615 Rac prophage; conserved protein
## 621 Rac prophage; predicted tail fiber protein
## 631 predicted protein
## 632 lipoprotein
## 638 ring 1,2-phenylacetyl-CoA epoxidase subunit
## 639 ring 1,2-phenylacetyl-CoA epoxidase possible subunit, not required for in vitro activity
## 640 ring 1,2-phenylacetyl-CoA epoxidase subunit
## 641 ring 1,2-phenylacetyl-CoA epoxidase subunit
## 642 ring 1,2-phenylacetyl-CoA epoxidase, NAD(P)H oxidoreductase component
## 643 2,3-dehydroadipyl-CoA hydratase
## 644 1,2-epoxyphenylacetyl-CoA isomerase, oxepin-CoA-forming
## 645 3-hydroxyadipyl-CoA dehydrogenase, NAD+-dependent
## 646 thioesterase, most active with ring-hydroxylated phenylacetyl-coenzyme A thioesters
## 647 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase
## 649 DNA-binding transcriptional repressor of phenylacetic acid degradation paa operon, phenylacetyl-CoA inducer
## 652 IS2 transposase TnpB
## 657 inner membrane protein
## 658 predicted CDP-diglyceride synthase
## 659 predicted hydrolase
## 667 toxic polypeptide, small
## 676 potassium-tellurite ethidium and proflavin transporter
## 684 mRNA interferase toxin of the HicAB toxin-antitoxin system
## 687 polyhydroxybutyrate (PHB) synthase, ABC transporter periplasmic binding protein homolog
## 688 predicted spermidine/putrescine transporter subunit
## 689 predicted spermidine/putrescine transporter subunit
## 690 predicted spermidine/putrescine transporter subunit
## 695 inner membrane protein, DUF606 family
## 710 nitrate reductase 2 (NRZ), gamma subunit
## 711 nitrate reductase 2 (NRZ), delta subunit (assembly subunit)
## 712 nitrate reductase 2 (NRZ), beta subunit
## 717 formate dehydrogenase-N, alpha subunit, nitrate-inducible
## 718 formate dehydrogenase-N, Fe-S (beta) subunit, nitrate-inducible
## 726 D,D-dipeptide permease system, ATP-binding component
## 727 D,D-dipeptide permease system, ATP-binding component
## 728 D-ala-D-ala transporter subunit
## 729 D-ala-D-ala transporter subunit
## 730 D-ala-D-a la transporter subunit
## 732 oxygen sensor, c-di-GMP phosphodiesterase, heme-regulated; cold- and stationary phase-induced bioflim regulator
## 737 predicted peptidase
## 738 predicted porin protein
## 746 predicted fimbrial-like adhesin protein
## 748 serine protein kinase required for perister formation; toxin of HipAB toxin-antitoxin system
## 752 Autoinducer 2 import ATP-binding protein
## 753 Autoinducer 2 import system permease protein
## 754 autoinducer 2 import system permease protein
## 755 autoinducer 2-binding protein
## 756 putative autoinducer-2 (AI-2) aldolase
## 762 conserved protein
## 769 DNA-binding transcriptional repressor of multiple antibiotic resistance
## 770 DNA-binding transcriptional dual activator of multiple antibiotic resistance
## 785 Qin prophage; predicted tail fibre assembly protein
## 792 Rz-like equivalent, Qin prophage
## 794 Qin prophage; predicted lysozyme
## 795 Qin prophage; predicted protein
## 799 Qin prophage; predicted antitermination protein Q
## 803 Qin prophage; toxin of the RelE-RelB toxin-antitoxin system
## 809 Qin prophage; predicted protein
## 810 Qin prophage; predicted protein
## 812 Qin prophage; cell division inhibition protein
## 814 predicted oxidoreductase, Zn-dependent and NAD(P)-binding
## 817 predicted protein
## 822 S- and N-oxide reductase, A subunit, periplasmic
## 823 oxidoreductase, Fe-S subunit
## 824 oxidoreductase, membrane subunit
## 834 multidrug efflux system transporter
## 837 pyridine nucleotide transhydrogenase, beta subunit
## 840 predicted arginine/ornithine antiporter transporter
## 843 multicopy supressor of yjeE, yeaZ or ygjD deletion lethality, predicted response regulator of two-component regulatory system with sensor protein RstB
## 850 predicted outer membrane porin protein
## 851 glucuronide transporter
## 856 fused maltose and glucose-specific PTS enzymes: IIB component, IIC component
## 863 electron transport complex protein required for the reduction of SoxR
## 864 electron transport complex protein, iron-sulfur protein, required for the reduction of SoxR
## 865 electron transport complex protein required for the reduction of SoxR; predicted membrane-associated NADH oxidoreductase
## 866 electron transport complex protein required for the reduction of SoxR; predicted membrane protein
## 867 electron transport complex protein required for the reduction of SoxR
## 868 electron transport complex inner membrane NADH-quinone reductase required for the reduction of SoxR
## 878 fused fructose-specific PTS enzymes: IIBcomponent/IIC components
## 879 fructose-1-phosphate kinase
## 885 predicted enzyme
## 889 microcin C transporter YejABEF, periplasmic binding protein; ABC family
## 890 microcin C transporter YejABEF, permease subunit; ABC family
## 891 microcin C transporter YejABEF, permease subunit; ABC family
## 894 bicyclomycin/multidrug efflux system
## 899 conserved protein, UPF0352 family
## 903 heme lyase, CcmH subunit
## 904 periplasmic thioredoxin of cytochrome c-type biogenesis
## 905 heme lyase, CcmF subunit
## 906 periplasmic heme chaperone
## 907 cytochrome c biogenesis protein
## 908 heme exporter subunit
## 909 heme exporter subunit
## 910 heme exporter subunit
## 911 Quinol dehydrogenase, electron source for NapAB
## 912 nitrate reductase, small, cytochrome C550 subunit, periplasmic
## 913 ferredoxin-type protein essential for electron transfer from ubiquinol to periplasmic nitrate reductase (NapAB)
## 914 ferredoxin-type protein essential for electron transfer from ubiquinol to periplasmic nitrate reductase (NapAB)
## 915 nitrate reductase, periplasmic, large subunit
## 916 assembly protein for periplasmic nitrate reductase
## 922 oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions
## 926 phosphotransfer intermediate protein in two-component regulatory system with RcsBC
## 929 sensory histidine kinase in two-component regulatory system with AtoC
## 931 acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit
## 932 acetyl-CoA:acetoacetyl-CoA transferase, beta subunit
## 933 short chain fatty acid transporter
## 935 conserved protein
## 937 predicted protein
## 943 ribonucleoside-diphosphate reductase 1, beta subunit, ferritin-like protein
## 946 periplasmic glycerophosphodiester phosphodiesterase
## 948 sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit, FAD/NAD(P)-binding
## 949 sn-glycerol-3-phosphate dehydrogenase (anaerobic), membrane anchor subunit
## 951 conserved protein
## 953 2-keto-3-deoxy-L-rhamnonate aldolase
## 955 L-rhamnonate dehydratase
## 962 Undecaprenyl phosphate-alpha-L-ara4FN deformylase
## 963 4-amino-4-deoxy-L-arabinose transferase
## 964 undecaprenyl phosphate-alpha-L-ara4N exporter; flippase ArnEF subunit
## 967 o-succinylbenzoate-CoA ligase
## 968 o-succinylbenzoyl-CoA synthase
## 969 dihydroxynaphthoic acid synthetase
## 970 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
## 983 NADH:ubiquinone oxidoreductase, membrane subunit N
## 985 NADH:ubiquinone oxidoreductase, membrane subunit L
## 986 NADH:ubiquinone oxidoreductase, membrane subunit K
## 987 NADH:ubiquinone oxidoreductase, membrane subunit J
## 988 NADH:ubiquinone oxidoreductase, chain I
## 989 NADH:ubiquinone oxidoreductase, membrane subunit H
## 991 NADH:ubiquinone oxidoreductase, chain F
## 992 NADH:ubiquinone oxidoreductase, chain E
## 994 NADH:ubiquinone oxidoreductase, chain B
## 1001 histidine/lysine/arginine/ornithine transporter subunit
## 1002 histidine/lysine/arginine/ornithine transporter subunit
## 1007 amidophosphoribosyltransferase
## 1009 membrane-anchored periplasmic protein involved in septation
## 1013 pseudouridylate synthase I
## 1020 predicted protein
## 1021 conserved protein
## 1022 inner membrane protein, UPF0721 family
## 1023 murein DD-endopeptidase
## 1024 chorismate synthase
## 1027 predicted protein
## 1028 predicted fimbrial-like adhesin protein
## 1029 predicted fimbrial-like adhesin protein
## 1030 predicted fimbrial-like adhesin protein
## 1034 fused enoyl-CoA hydratase and epimerase and isomerase/3-hydroxyacyl-CoA dehydrogenase
## 1042 CPS-53 (KpLE1) prophage; bactoprenol-linked glucose translocase (flippase)
## 1043 CPS-53 (KpLE1) prophage; bactoprenol glucosyl transferase
## 1049 CPS-53 (KpLE1) prophage; conserved protein
## 1050 CPS-53 (KpLE1) prophage; predicted protein
## 1054 D-serine permease
## 1056 predicted multidrug efflux system
## 1058 DNA-binding response regulator in two-component regulatory system with EvgS
## 1070 predicted sensory kinase in two-component system with YpdB
## 1071 predicted response regulator in two-component system with YpdA
## 1073 fused predicted PTS enzymes: Hpr component/enzyme I component/enzyme IIA component
## 1074 aminopeptidase
## 1075 Xaa-Pro aminopeptidase
## 1076 predicted enzyme IIC component of PTS
## 1085 predicted DNA-binding protein, DUF1323 family
## 1094 predicted protein
## 1099 phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr)
## 1100 PEP-protein phosphotransferase of PTS system (enzyme I)
## 1103 predicted protein
## 1106 sulfate/thiosulfate transporter subunit
## 1107 sulfate/thiosulfate ABC transporter subunit
## 1108 sulfate/thiosulfate ABC transporter permease
## 1112 N-acetylmuramic acid 6-phosphate (MurNAc-6-P) etherase
## 1113 N-acetylmuramic acid permease, EIIBC component, PTS system
## 1117 inner membrane protein
## 1119 N-acetylmuramoyl-l-alanine amidase I
## 1121 eut operon transcriptional activator, AraC family
## 1122 predicted carboxysome structural protein with predicted role in ethanolamine utilization
## 1123 predicted carboxysome structural protein with predicted role in ethanolamine utilization
## 1124 ethanolamine ammonia-lyase, small subunit (light chain)
## 1128 CPZ-55 prophage; predicted protein
## 1130 CPZ-55 prophage; predicted protein
## 1132 CPZ-55 prophage; predicted protein
## 1135 reactivating factor for ethanolamine ammonia lyase
## 1137 ethanol dehydrogenase involved in ethanolamine utilization; aldehyde reductase, converts acetaldehyde to ethanol
## 1138 predicted chaperonin, ethanolamine utilization protein
## 1139 aldehyde oxidoreductase, ethanolamine utilization protein
## 1141 predicted carboxysome structural protein, ethanolamine utilization protein
## 1142 phosphate acetyltransferase
## 1143 cobalamin adenosyltransferase involved in ethanolamine utilization
## 1144 conserved protein
## 1145 conserved protein with nucleoside triphosphate hydrolase domain
## 1148 transaldolase A
## 1156 predicted reductase, function unknown, ArsC family; low abundance protein
## 1157 N-succinyl-diaminopimelate deacylase
## 1160 elongator methionine tRNA (ac4C34) acetyltransferase
## 1163 lipoprotein required for OM biogenesis, in BamABCDE complex
## 1165 DNA-binding transcriptional repressor, regulatory protein accessory to GcvA
## 1167 hydrogenase 4, 4Fe-4S subunit
## 1168 hydrogenase 4, membrane subunit
## 1169 hydrogenase 4, membrane subunit
## 1170 hydrogenase 4, membrane subunit
## 1171 hydrogenase 4, membrane subunit
## 1172 hydrogenase 4, membrane subunit
## 1173 hydrogenase 4, subunit
## 1174 hydrogenase 4, Fe-S subunit
## 1175 hydrogenase 4, Fe-S subunit
## 1176 predicted processing element hydrogenase 4
## 1177 DNA-binding transcriptional activator, formate sensing
## 1180 predicted peptidase, has TPR repeats
## 1185 phosphoribosylaminoimidazole synthetase
## 1187 polyphosphate kinase, component of RNA degradosome
## 1191 outer membrane lipoprotein
## 1198 lipoprotein required for OM biogenesis, in BamABCDE complex
## 1199 conserved protein, UPF0070 family
## 1201 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
## 1205 gap repair protein
## 1206 membrane-associated, 16S rRNA-binding GTPase
## 1208 leader peptidase (signal peptidase I)
## 1210 RseC protein involved in reduction of the SoxR iron-sulfur cluster
## 1211 anti-sigma E factor, binds RseA
## 1212 anti-sigma factor
## 1223 conserved protein, DTW domain
## 1225 phosphatidylserine synthase (CDP-diacylglycerol-serine O-phosphatidyltransferase)
## 1229 conserved protein, UPF0124 family
## 1235 fused chorismate mutase T/prephenate dehydrogenase
## 1238 probable periplasmic inhibitor of YfiN activity
## 1239 probable inner membrane diguanylate cyclase
## 1241 50S ribosomal subunit protein L19
## 1242 tRNA m(1)G37 methyltransferase, SAM-dependent
## 1243 16S rRNA processing protein
## 1246 predicted inner membrane protein
## 1252 conserved protein, UPF0125 family
## 1260 CP4-57 prophage; conserved protein
## 1263 CP4-57 prophage; RNase LS
## 1267 CP4-57 prophage; predicted DNA-binding transcriptional regulator
## 1268 CP4-57 prophage; predicted inner membrane protein
## 1269 CP4-57 prophage; predicted protein
## 1272 CP4-57 prophage; predicted antirestriction protein
## 1273 CP4-57 prophage; predicted DNA repair protein
## 1274 predicted protein
## 1275 CP4-57 prophage; antitoxin of the YpjF-YfjZ toxin-antitoxin system
## 1278 carbon starvation induced gene
## 1279 L-2-hydroxyglutarate oxidase
## 1280 succinate-semialdehyde dehydrogenase I, NADP-dependent
## 1282 gamma-aminobutyrate transporter
## 1286 tributyltin-inducible repressor of ygaVP
## 1292 Hydrogen donor for NrdEF electron transport system; glutaredoxin-like protein
## 1293 flavodoxin required for NrdEF cluster assembly
## 1294 ribonucleoside-diphosphate reductase 2, alpha subunit
## 1296 glycine betaine transporter subunit
## 1299 probable L-valine exporter, norvaline resistance
## 1302 multidrug efflux system
## 1306 inner membrane protein, COG1238 family
## 1314 glucitol/sorbitol-specific enzyme IIC component of PTS
## 1315 glucitol/sorbitol-specific enzyme IIB component of PTS
## 1316 glucitol/sorbitol-specific enzyme IIA component of PTS
## 1319 DNA-bindng transcriptional repressor
## 1322 anaerobic nitric oxide reductase flavorubredoxin
## 1327 fused cellobiose/arbutin/salicin-specific PTS enzymes: IIB component/IC component
## 1329 protease involved in processing C-terminal end of HycE
## 1330 protein required for maturation of hydrogenase 3
## 1331 hydrogenase 3 and formate hydrogenase complex, HycG subunit
## 1332 formate hydrogenlyase complex iron-sulfur protein
## 1333 hydrogenase 3, large subunit
## 1334 hydrogenase 3, membrane subunit
## 1335 hydrogenase 3, membrane subunit
## 1338 protein involved in nickel insertion into hydrogenases 3
## 1339 GTP hydrolase involved in nickel liganding into hydrogenases
## 1340 protein required for maturation of hydrogenases 1 and 3
## 1341 protein required for maturation of hydrogenases
## 1348 predicted dehydrogenase, with NAD(P)-binding Rossmann-fold domain
## 1350 predicted class II aldolase
## 1355 L-isoaspartate protein carboxylmethyltransferase type II
## 1356 broad specificity 5(3)-nucleotidase and polyphosphatase
## 1357 tRNA(Glu) U13 pseudouridine synthase
## 1358 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
## 1359 4-diphosphocytidyl-2C-methyl-D-erythritol synthase
## 1363 inner membrane protein, UPF0382 family
## 1366 cysteine sulfinate desulfinase
## 1372 exonuclease V (RecBCD complex), alpha chain
## 1373 exonuclease V (RecBCD complex), beta subunit
## 1375 exonuclease V (RecBCD complex), gamma chain
## 1376 predicted protein
## 1377 conserved protein, DUF2509 family
## 1378 conserved protein
## 1380 thymidylate synthetase
## 1382 fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein
## 1388 lysophospholipid transporter
## 1395 2-deoxy-D-gluconate 3-dehydrogenase
## 1400 predicted transcriptional regulator
## 1402 expressed protein
## 1407 IS2 transposase TnpB
## 1410 xanthine dehydrogenase, molybdenum binding subunit
## 1411 xanthine dehydrogenase, FAD-binding subunit
## 1417 D-stereospecific phenylhydantoinase
## 1419 conserved protein with NAD(P)-binding Rossman fold
## 1422 predicted oxidoreductase, Fe-S subunit
## 1424 predicted oxidoreductase
## 1426 xanthine permease
## 1427 guanine deaminase
## 1429 predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit
## 1431 predicted transporter
## 1434 lysine tRNA synthetase, constitutive
## 1436 ssDNA exonuclease, 5 --> 3-specific
## 1437 protein disulfide isomerase II
## 1440 predicted protein
## 1448 glycine cleavage complex lipoylprotein
## 1450 predicted oxidoreductase with FAD/NAD(P)-binding domain
## 1451 2-octaprenyl-6-methoxyphenol hydroxylase, FAD/NAD(P)-binding
## 1452 proline aminopeptidase P II
## 1460 methylmalonyl-CoA mutase
## 1461 membrane ATPase/protein kinase
## 1462 methylmalonyl-CoA decarboxylase, biotin-independent
## 1471 conserved protein with nucleoside triphosphate hydrolase domain
## 1472 predicted DNA-binding transcriptional regulator
## 1473 fructose 1,6 bisphosphatase isozyme
## 1474 predicted dehydrogenase
## 1475 predicted fused mannitol-specific PTS enzymes: IIB component/IIC component
## 1480 biosynthetic arginine decarboxylase, PLP-binding
## 1487 16S rRNA m(3)U1498 methyltransferase, SAM-dependent
## 1489 predicted protein
## 1495 conserved protein
## 1496 conserved protein, UPF0102 family
## 1497 DnaA initiator-associating factor for replication initiation
## 1504 predicted acyltransferase with acyl-CoA N-acyltransferase domain
## 1506 predicted peptidase (collagenase-like)
## 1510 ATP-dependent RNA helicase
## 1515 tRNA U55 pseudouridine synthase
## 1517 fused protein chain initiation factor 2, IF2: membrane protein/conserved protein
## 1518 transcription termination/antitermination L factor
## 1523 phosphoglucosamine mutase
## 1529 DNA-binding transcriptional repressor
## 1530 rhomboid intramembrane serine protease
## 1533 glycogen phosphorylase
## 1534 glycogen synthase
## 1535 glucose-1-phosphate adenylyltransferase
## 1536 glycogen debranching enzyme
## 1540 gluconate transporter, low affinity GNT 1 system
## 1547 IS1 repressor TnpA
## 1553 glycerophosphodiester phosphodiesterase, cytosolic
## 1554 glycerol-3-phosphate transporter subunit
## 1555 glycerol-3-phosphate transporter subunit
## 1558 leucine/isoleucine/valine transporter subunit
## 1559 leucine/isoleucine/valine transporter subunit
## 1560 leucine/isoleucine/valine transporter subunit
## 1561 leucine/isoleucine/valine transporter subunit
## 1566 predicted transporter subunit: membrane component of ABC superfamily
## 1567 predicted transporter subunit: ATP-binding component of ABC superfamily
## 1569 16S rRNA m(2)G966 methyltransferase, SAM-dependent
## 1580 Nickel-binding, heme-binding periplasmic protein
## 1581 nickel transporter subunit
## 1582 nickel transporter subunit
## 1583 nickel transporter subunit
## 1584 nickel transporter subunit
## 1586 rhsB element core protein RshB
## 1589 Predicted permease subunit, ABC transporter superfamily, inner membrane protein
## 1590 fused ribosome-associated ATPase: ATP-binding protein/ATP-binding protein/predicted membrane protein
## 1599 predicted SAM-dependent methyltransferase
## 1605 arsenite/antimonite transporter
## 1615 anaerobic multidrug efflux transporter, ArcA-regulated
## 1623 predicted DNA-binding transcriptional regulator
## 1632 cellulose synthase subunit
## 1633 endo-1,4-D-glucanase
## 1634 regulator of cellulose synthase, cyclic di-GMP binding
## 1637 cellulose production protein
## 1638 predicted protein
## 1642 dipeptide transporter
## 1643 dipeptide/heme transporter
## 1644 dipeptide/heme transporter
## 1650 3-methyl-adenine DNA glycosylase I, constitutive
## 1659 IS150 transposase A
## 1661 glycine tRNA synthetase, beta subunit
## 1665 inner membrane protein, YiaAB family
## 1670 fused D-xylose transporter subunits of ABC superfamily: ATP-binding components
## 1678 2,3-diketo-L-gulonate reductase, NADH-dependent
## 1680 L-dehydroascorbate transporter, TRAP permease small subunit for TRAP (TRipartite ATP-independent Periplasmic) family transporter YiaMNO
## 1681 L-dehydroascorbate transporter, TRAP permease large subunit for TRAP (TRipartite ATP-independent Periplasmic) family transporter YiaMNO
## 1682 L-dehydroascorbate transporter, periplasmic binding protein for TRAP (TRipartite ATP-independent Periplasmic) family transporter YiaMNO
## 1683 L-xylulose kinase
## 1684 3-keto-L-gulonate 6-phosphate decarboxylase
## 1685 predicted L-xylulose 5-phosphate 3-epimerase
## 1689 membrane fusion protein (MFP) component of efflux pump, signal anchor
## 1693 selenocysteinyl-tRNA-specific translation factor
## 1696 rhsA element core protein RshA
## 1699 predicted protein
## 1702 mannitol-1-phosphate dehydrogenase, NAD-dependent
## 1706 L-lactate permease
## 1707 dual role activator/repressor for lldPRD operon
## 1719 RNA polymerase, omega subunit
## 1725 predicted alpha-glucosidase
## 1736 membrane protein regulates uhpT expression
## 1737 sensory histidine kinase in two-component regulatory sytem with UhpA
## 1739 acetolactate synthase I, small subunit
## 1744 predicted DNA-binding transcriptional regulator
## 1745 inner membrane protein
## 1748 predicted sulfatase/phosphatase
## 1759 galactonate dehydratase
## 1760 2-oxo-3-deoxygalactonate 6-phosphate aldolase
## 1761 2-oxo-3-deoxygalactonate kinase
## 1766 DNA gyrase, subunit B
## 1767 gap repair protein
## 1768 DNA polymerase III, beta subunit
## 1770 50S ribosomal subunit protein L34
## 1771 protein C5 component of RNase P
## 1772 conserved protein, UPF0161 family
## 1778 multidrug efflux system protein
## 1780 predicted phosphopantetheinyl transferase, COG2091 family
## 1784 inner membrane protein, creBC regulon
## 1786 predicted 6-phosphogluconolactonase
## 1787 predicted xylanase
## 1789 cryptic phospho-beta-glucosidase B
## 1792 negative regulator of PhoR/PhoB two-component regulator
## 1794 phosphate transporter subunit
## 1799 F1 sector of membrane-bound ATP synthase, epsilon subunit
## 1800 F1 sector of membrane-bound ATP synthase, beta subunit
## 1802 F1 sector of membrane-bound ATP synthase, alpha subunit
## 1803 F1 sector of membrane-bound ATP synthase, delta subunit
## 1805 F0 sector of membrane-bound ATP synthase, subunit c
## 1806 F0 sector of membrane-bound ATP synthase, subunit a
## 1813 predicted von Willibrand factor containing protein
## 1816 predicted cytoplasmic sugar-binding protein
## 1817 fused D-ribose transporter subunits of ABC superfamily: ATP-binding components
## 1818 D-ribose transporter subunit
## 1820 ribokinase
## 1822 predicted multidrug or homocysteine efflux system
## 1829 acetolactate synthase II, small subunit
## 1831 dihydroxyacid dehydratase
## 1841 UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase
## 1843 UDP-N-acetyl glucosamine-2-epimerase
## 1844 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase
## 1845 dTDP-glucose 4,6-dehydratase
## 1846 glucose-1-phosphate thymidylyltransferase
## 1847 TDP-fucosamine acetyltransferase
## 1848 TDP-4-oxo-6-deoxy-D-glucose transaminase
## 1849 O-antigen translocase
## 1850 TDP-Fuc4NAc:lipidIIFuc4NAc transferase
## 1851 predicted Wzy protein involved in ECA polysaccharide chain elongation
## 1856 predicted protoheme IX synthesis protein
## 1857 predicted uroporphyrinogen III methyltransferase
## 1858 uroporphyrinogen III synthase
## 1862 predicted lipoprotein
## 1863 diaminopimelate epimerase
## 1864 conserved protein, DUF484 family
## 1865 site-specific tyrosine recombinase
## 1870 predicted inner membrane protein
## 1878 lysophospholipase L2
## 1886 bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase/ S-adenosylmethionine:2-DMK methyltransferase
## 1887 conserved protein, SCP2 family
## 1889 TatABCE protein translocation system subunit
## 1890 TatABCE protein translocation system subunit
## 1891 TatABCE protein translocation system subunit
## 1894 3-octaprenyl-4-hydroxybenzoate decarboxylase
## 1896 3-ketoacyl-CoA thiolase (thiolase I)
## 1898 proline dipeptidase
## 1899 conserved protein, UPF0029 family
## 1900 potassium transporter
## 1902 molybdopterin-guanine dinucleotide biosynthesis protein B
## 1905 Thr/Ser kinase implicated in Cpx stress response
## 1914 fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein
## 1918 predicted DNA-binding transcriptional regulator
## 1922 predicted transporter
## 1923 predicted transporter
## 1926 aldose-ketose isomerase; D-mannose isomerase
## 1927 predicted aldolase
## 1929 predicted sugar kinase
## 1931 alpha-D-Glucose-1-P phosphatase, anomer-specific
## 1932 predicted inner membrane protein
## 1933 D-tyr-tRNA(Tyr) deacylase
## 1937 formate dehydrogenase formation protein
## 1938 formate dehydrogenase-O, cytochrome b556 subunit
## 1939 formate dehydrogenase-O, Fe-S subunit
## 1943 putative frv operon regulator; contains a PTS EIIA domain
## 1944 predicted peptidase
## 1945 fused predicted PTS enzymes: IIB component/IIC component
## 1947 L-rhamnose mutarotase
## 1949 L-rhamnose isomerase
## 1957 sensory histidine kinase in two-component regulatory system with CpxR
## 1967 conserved protein, UPF0381 family
## 1971 glycerol kinase
## 1976 molecular chaperone and ATPase component of HslUV protease
## 1983 preprotein translocase membrane subunit
## 1985 50S ribosomal subunit protein L11
## 1992 tyrosine lyase, involved in thiamin-thiazole moiety synthesis
## 1993 thiamin biosynthesis ThiGH complex subunit
## 1994 immediate sulfur donor in thiazole formation
## 1995 adenylyltransferase, modifies ThiS C-terminus
## 1996 thiamin phosphate synthase (thiamin phosphate pyrophosphorylase)
## 1999 NADH pyrophosphatase
## 2000 uroporphyrinogen decarboxylase
## 2001 endonuclease V
## 2003 HU, DNA-binding transcriptional regulator, alpha subunit
## 2006 sensory histidine kinase in two-component regulatory system with ZraR
## 2008 phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase
## 2013 malate synthase A
## 2026 predicted lipoprotein
## 2027 conserved protein
## 2032 maltose transporter subunit
## 2038 chorismate--pyruvate lyase
## 2042 DNA-binding transcriptional repressor of SOS regulon
## 2046 predicted protein
## 2056 thiamin phosphate synthase
## 2067 acetate transporter
## 2070 nitrite reductase, formate-dependent, cytochrome
## 2071 nitrite reductase, formate-dependent, penta-heme cytochrome c
## 2072 formate-dependent nitrite reductase, 4Fe4S subunit
## 2074 heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE
## 2075 heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfF
## 2080 outer membrane factor of efflux pump
## 2081 membrane translocase (MDR) of MdtNOP efflux pump, PET family
## 2082 membrane fusion protein of efflux pump
## 2085 D-allose kinase
## 2086 allulose-6-phosphate 3-epimerase
## 2087 D-allose transporter subunit
## 2093 carbon-phosphorus lyase complex accessory protein, phosphodiesterase
## 2094 predicted acyltransferase with acyl-CoA N-acyltransferase domain
## 2095 ribose 1,5-bisphosphokinase
## 2096 carbon-phosphorus lyase complex subunit
## 2098 carbon-phosphorus lyase complex subunit
## 2099 carbon-phosphorus lyase complex subunit
## 2100 carbon-phosphorus lyase complex subunit
## 2101 carbon-phosphorus lyase complex subunit
## 2102 carbon-phosphorus lyase complex subunit
## 2104 phosphonate/organophosphate ester transporter subunit
## 2108 mutational suppressor of yhjH motility mutation, function unknown; related to Dynamin GTPase
## 2112 sensory histidine kinase in two-component regulatory system with BasR
## 2113 DNA-binding response regulator in two-component regulatory system with BasS
## 2124 DNA-binding response regulator in two-component regulatory system with DcuS
## 2126 conserved protein
## 2128 predicted protein
## 2135 predicted transcriptional regulator
## 2136 fused thiol:disulfide interchange protein: activator of DsbC/conserved protein
## 2142 Cpn10 chaperonin GroES, small subunit of GroESL
## 2153 fumarate reductase (anaerobic), membrane anchor subunit
## 2154 fumarate reductase (anaerobic), membrane anchor subunit
## 2155 fumarate reductase (anaerobic), Fe-S subunit
## 2159 predicted protein
## 2161 predicted mechanosensitive channel
## 2167 predicted carbohydrate kinase
## 2168 ADP-binding protein essential for nucleoid integrity
## 2169 N-acetylmuramoyl-l-alanine amidase II
## 2170 methyl-directed mismatch repair protein
## 2174 modulator for HflB protease specific for phage lambda cII repressor
## 2178 nitric oxide-sensitive repressor for NO regulon
## 2181 conserved protein, DUF2170 family
## 2183 conserved protein, DUF2491 family
## 2184 inner membrane protein, UPF0719 family
## 2185 conserved protein, DUF1190 family
## 2193 L-ascorbate-specific enzyme IIC component of PTS
## 2194 L-ascorbate-specific enzyme IIB component of PTS
## 2195 L-ascorbate-specific enzyme IIA component of PTS
## 2196 3-keto-L-gulonate 6-phosphate decarboxylase
## 2197 L-xylulose 5-phosphate 3-epimerase
## 2200 30S ribosomal subunit protein S6
## 2201 primosomal protein N
## 2202 30S ribosomal subunit protein S18
## 2218 predicted outer membrane protein and surface antigen
## 2219 large conserved protein, DUF490 family
## 2221 antitoxin of the ChpBS toxin-antitoxin system
## 2225 predicted sugar transporter subunit: ATP-binding component of ABC superfamily
## 2226 predicted sugar transporter subunit: membrane component of ABC superfamily
## 2240 aspartate carbamoyltransferase, regulatory subunit
## 2241 aspartate carbamoyltransferase, catalytic subunit
## 2252 valyl-tRNA synthetase
## 2255 lipopolysaccharide export ABC permease of the LptBFGC export complex
## 2260 5-keto-D-gluconate-5-reductase
## 2264 IS2 repressor TnpA
## 2268 predicted transporter
## 2269 predicted oxidoreductase
## 2272 KpLE2 phage-like element; iron-dicitrate transporter subunit
## 2273 KpLE2 phage-like element; iron-dicitrate transporter subunit
## 2274 KpLE2 phage-like element; iron-dicitrate transporter subunit
## 2275 KpLE2 phage-like element; iron-dicitrate transporter subunit
## 2277 KpLE2 phage-like element; transmembrane signal transducer for ferric citrate transport
## 2282 KpLE2 phage-like element; predicted dehydratase
## 2283 KpLE2 phage-like element; predicted lyase/synthase
## 2285 KpLE2 phage-like element; predicted DNA-binding transcriptional regulator
## 2286 KpLE2 phage-like element; predicted epimerase
## 2288 KpLE2 phage-like element; predicted nucleoside triphosphatase
## 2289 KpLE2 phage-like element; predicted phosphotransferase enzyme IIC component
## 2290 predicted enzyme IIB component of PTS
## 2293 KpLE2 phage-like element; predicted acetyltransferase
## 2296 N-acetylneuraminic acid mutarotase
## 2301 fimbrial protein involved in type 1 pilus biosynthesis
## 2303 outer membrane usher protein, type 1 fimbrial synthesis
## 2304 minor component of type 1 fimbriae
## 2305 minor component of type 1 fimbriae
## 2314 isoaspartyl dipeptidase
## 2315 inner membrane protein, SpmB family
## Start End
## 2 337 2799
## 3 2801 3733
## 11 10643 11356
## 16 16751 16960
## 20 19811 20314
## 23 21181 21399
## 24 21407 22348
## 25 22391 25207
## 27 25826 26275
## 31 29651 30799
## 34 34781 35371
## 38 39244 40386
## 40 42403 43173
## 42 44180 45466
## 45 47246 47776
## 48 50380 51222
## 49 51229 51606
## 50 51609 52430
## 51 52427 53416
## 55 59687 60346
## 59 66835 68337
## 63 72229 72927
## 64 72911 74521
## 69 78848 79453
## 70 79464 80864
## 71 80867 81958
## 75 85630 87354
## 78 89634 90092
## 79 90094 91035
## 80 91032 91397
## 81 91413 93179
## 82 93166 94653
## 83 94650 96008
## 84 96002 97084
## 85 97087 98403
## 86 98403 99647
## 88 100765 102240
## 89 102233 103153
## 90 103155 103985
## 97 111649 111846
## 98 111856 112599
## 101 114522 115724
## 102 115714 117099
## 105 118733 119284
## 109 123017 125680
## 115 134788 135582
## 122 142779 143705
## 128 147944 148795
## 131 151003 151599
## 132 151626 152231
## 133 152243 152812
## 134 152829 155426
## 137 157253 157732
## 139 159186 160112
## 141 160782 161486
## 146 169778 170575
## 147 170575 171465
## 152 177001 177624
## 153 177662 178462
## 159 510865 511797
## 162 513625 514083
## 164 515143 515820
## 167 517564 518373
## 169 518957 519643
## 171 522485 526765
## 177 533140 534921
## 182 539789 541090
## 184 542485 543270
## 185 543281 544516
## 188 548850 549665
## 190 550750 551817
## 192 552441 553163
## 196 555884 556096
## 199 558197 558889
## 200 558920 561523
## 201 561559 562542
## 205 566065 566364
## 209 570116 570667
## 211 571591 571692
## 212 571689 572144
## 213 572144 572314
## 214 572307 572597
## 215 572594 572956
## 219 576621 576836
## 220 576836 577333
## 221 577330 577791
## 231 586314 587204
## 232 587205 590177
## 234 592551 593993
## 237 596354 596686
## 238 596702 597925
## 250 612038 613162
## 251 613165 613383
## 254 618607 619422
## 255 619419 620411
## 259 624108 625283
## 260 625293 626903
## 261 626917 627774
## 262 627774 628520
## 268 633970 634599
## 280 669154 669795
## 281 669797 670828
## 282 670828 671409
## 286 675934 676641
## 289 678731 679438
## 293 683753 684478
## 294 684478 685152
## 298 688566 690104
## 300 691097 691564
## 305 698797 699549
## 306 699597 700817
## 313 709423 709869
## 318 712210 712755
## 321 716169 717488
## 324 720279 720956
## 325 720953 723637
## 326 723630 724202
## 327 724211 726259
## 328 726282 727955
## 331 728806 732999
## 335 738224 738733
## 338 742050 742793
## 339 742816 743472
## 340 743466 744398
## 341 744388 745122
## 344 747144 748205
## 345 748202 748930
## 349 754400 754789
## 350 754783 755130
## 351 755130 756896
## 353 757929 760730
## 355 762237 763403
## 358 765207 767183
## 360 770681 772249
## 361 772265 773404
## 362 773419 773532
## 364 773975 774379
## 365 774376 775068
## 368 776963 778255
## 369 778290 778811
## 371 781308 782351
## 377 787020 788060
## 378 788054 789202
## 379 789206 790252
## 384 794312 795085
## 385 795085 795774
## 396 808567 809607
## 397 809604 810758
## 398 810745 811500
## 402 816267 817256
## 403 817278 817790
## 404 817793 818278
## 405 818271 818516
## 409 820765 821721
## 410 821721 822962
## 413 824225 825331
## 414 825342 826475
## 415 826468 828204
## 416 828197 829195
## 420 832293 834443
## 425 837753 838430
## 430 844964 845686
## 438 852406 852873
## 444 859397 861829
## 447 863603 864352
## 449 865791 866756
## 450 866743 868614
## 451 868634 870172
## 452 870190 871110
## 454 872202 874550
## 465 884539 885354
## 471 890136 890423
## 476 894214 895347
## 477 895357 896310
## 479 897212 897700
## 482 900089 900757
## 483 900757 901473
## 484 901480 902211
## 487 903816 904139
## 490 906075 907505
## 491 907516 908517
## 493 910405 911373
## 499 918458 919573
## 502 922136 922456
## 505 925951 926655
## 506 926697 928418
## 511 936595 937206
## 514 940182 942626
## 515 942637 943254
## 533 963543 965807
## 534 965844 967592
## 546 1349852 1350658
## 547 1350660 1351652
## 548 1351652 1352542
## 549 1352529 1353494
## 554 1359144 1359908
## 556 1360767 1362254
## 557 1362256 1363536
## 561 1366825 1367049
## 562 1367049 1367408
## 565 1368240 1369919
## 566 1369933 1371225
## 567 1371246 1372127
## 568 1372114 1372956
## 569 1372987 1374039
## 570 1374058 1374846
## 571 1374856 1375911
## 572 1375908 1378175
## 576 1382141 1383538
## 590 1397745 1398260
## 591 1398271 1399797
## 592 1399834 1401279
## 600 1410024 1411259
## 602 1411555 1411764
## 604 1412008 1412817
## 607 1415862 1416032
## 610 1417180 1417335
## 613 1418389 1418685
## 614 1418708 1419130
## 615 1419143 1420000
## 621 1427073 1430435
## 631 1441075 1443714
## 632 1443711 1443896
## 638 1451951 1452880
## 639 1452892 1453179
## 640 1453188 1453934
## 641 1453949 1454446
## 642 1454454 1455524
## 643 1455521 1456288
## 644 1456288 1457076
## 645 1457078 1458505
## 646 1458495 1458917
## 647 1458917 1460122
## 649 1461563 1462513
## 652 1465945 1466850
## 657 1475645 1476250
## 658 1476250 1477146
## 659 1477162 1478919
## 667 1489946 1490095
## 676 1498597 1499589
## 684 1507310 1507486
## 687 1509678 1510823
## 688 1510841 1511854
## 689 1511855 1512796
## 690 1512786 1513580
## 695 1515906 1516355
## 710 1533961 1534641
## 711 1534638 1535333
## 712 1535333 1536877
## 717 1545425 1548472
## 718 1548485 1549369
## 726 1555136 1556062
## 727 1556055 1557041
## 728 1557038 1557934
## 729 1557931 1558953
## 730 1558955 1560505
## 732 1561358 1563757
## 737 1570431 1573226
## 738 1573271 1575643
## 746 1585817 1586320
## 748 1588878 1590200
## 752 1599514 1601049
## 753 1601043 1602071
## 754 1602071 1603063
## 755 1603075 1604097
## 756 1604124 1604999
## 762 1609990 1610349
## 769 1617144 1617578
## 770 1617598 1617981
## 785 1632334 1632909
## 792 1637054 1637551
## 794 1637548 1638081
## 795 1638078 1638389
## 799 1640513 1641265
## 803 1643370 1643657
## 809 1646532 1646687
## 810 1646689 1646817
## 812 1647633 1647821
## 814 1650920 1651939
## 817 1653832 1654173
## 822 1658580 1661003
## 823 1661014 1661631
## 824 1661633 1662487
## 834 1670844 1671173
## 837 1672996 1674384
## 840 1677581 1678963
## 843 1680183 1680902
## 850 1689610 1690875
## 851 1690914 1692287
## 856 1697379 1698971
## 863 1703791 1704372
## 864 1704372 1704950
## 865 1704943 1707165
## 866 1707166 1708224
## 867 1708228 1708848
## 868 1708852 1709547
## 878 2257741 2259432
## 879 2259449 2260387
## 885 2265851 2266837
## 889 2270386 2272200
## 890 2272201 2273295
## 891 2273295 2274320
## 894 2276592 2277782
## 899 2282151 2282378
## 903 2289380 2290432
## 904 2290429 2290986
## 905 2290983 2292926
## 906 2292923 2293402
## 907 2293399 2293608
## 908 2293605 2294342
## 909 2294384 2295046
## 910 2295043 2295666
## 911 2295679 2296281
## 912 2296291 2296740
## 913 2296737 2297600
## 914 2297587 2298282
## 915 2298289 2300775
## 916 2300772 2301035
## 922 2306713 2307363
## 926 2311510 2314182
## 929 2318065 2319891
## 931 2321469 2322131
## 932 2322131 2322781
## 933 2322778 2324100
## 935 2325389 2326165
## 937 2332358 2332981
## 943 2345406 2346536
## 946 2347957 2349033
## 948 2350669 2352297
## 949 2352287 2353546
## 951 2354926 2355825
## 953 2356064 2356867
## 955 2358231 2359436
## 962 2368040 2368930
## 963 2368930 2370582
## 964 2370579 2370914
## 967 2371670 2373025
## 968 2373022 2373984
## 969 2373984 2374841
## 970 2374856 2375614
## 983 2388070 2389527
## 985 2391227 2393068
## 986 2393065 2393367
## 987 2393364 2393918
## 988 2393930 2394472
## 989 2394487 2395464
## 991 2398240 2399577
## 992 2399574 2400074
## 994 2401973 2402635
## 1001 2421758 2422531
## 1002 2422539 2423255
## 1007 2426743 2428260
## 1009 2429044 2429706
## 1013 2432846 2433658
## 1020 2441913 2442191
## 1021 2442225 2442773
## 1022 2442773 2443582
## 1023 2443582 2444406
## 1024 2444410 2445495
## 1027 2447250 2448071
## 1028 2448073 2448612
## 1029 2448609 2449097
## 1030 2449094 2449606
## 1034 2455037 2457181
## 1042 2465877 2466239
## 1043 2466236 2467156
## 1049 2473006 2473542
## 1050 2473533 2473895
## 1054 2475869 2477206
## 1056 2478660 2480198
## 1058 2481777 2482391
## 1070 2496693 2498390
## 1071 2498405 2499139
## 1073 2500012 2502507
## 1074 2502532 2503569
## 1075 2503569 2504654
## 1076 2504669 2505916
## 1085 2516489 2516833
## 1094 2525963 2526181
## 1099 2531786 2532043
## 1100 2532088 2533815
## 1103 2535364 2535738
## 1106 2537739 2538836
## 1107 2538826 2539701
## 1108 2539701 2540534
## 1112 2543795 2544691
## 1113 2544695 2546119
## 1117 2549299 2549748
## 1119 2550374 2551243
## 1121 2552152 2553204
## 1122 2553250 2553750
## 1123 2553763 2554422
## 1124 2554432 2555319
## 1128 2559390 2559635
## 1130 2560133 2560549
## 1132 2561614 2561991
## 1135 2563503 2564906
## 1137 2566346 2567533
## 1138 2567523 2568359
## 1139 2568370 2569773
## 1141 2570179 2570472
## 1142 2570511 2571527
## 1143 2571524 2572327
## 1144 2572324 2573025
## 1145 2573000 2573479
## 1148 2576688 2577638
## 1156 2589269 2589625
## 1157 2589629 2590756
## 1160 2591866 2593881
## 1163 2595853 2596887
## 1165 2597928 2598500
## 1167 2599223 2599840
## 1168 2599840 2601858
## 1169 2601869 2602816
## 1170 2602833 2604272
## 1171 2604284 2604934
## 1172 2604939 2606519
## 1173 2606509 2608176
## 1174 2608186 2608731
## 1175 2608728 2609486
## 1176 2609479 2609892
## 1177 2609922 2611934
## 1180 2614116 2615579
## 1185 2619219 2620256
## 1187 2621066 2623132
## 1191 2627814 2628332
## 1198 2635496 2636674
## 1199 2636685 2637305
## 1201 2638708 2639826
## 1205 2699763 2700491
## 1206 2700503 2701408
## 1208 2702357 2703331
## 1210 2705344 2705823
## 1211 2705820 2706776
## 1212 2706776 2707426
## 1223 2717245 2717943
## 1225 2720749 2722104
## 1229 2732325 2733056
## 1235 2736970 2738091
## 1238 2739897 2740415
## 1239 2740405 2741631
## 1241 2742205 2742552
## 1242 2742594 2743361
## 1243 2743392 2743940
## 1246 2745984 2746775
## 1252 2752030 2752320
## 1260 2759373 2761562
## 1263 2763940 2765013
## 1267 2767725 2768426
## 1268 2768467 2768703
## 1269 2768703 2769146
## 1272 2773941 2774399
## 1273 2774408 2774890
## 1274 2774899 2775099
## 1275 2775137 2775454
## 1278 2787007 2787984
## 1279 2788004 2789272
## 1280 2789295 2790743
## 1282 2792275 2793675
## 1286 2795233 2795532
## 1292 2798745 2798990
## 1293 2798987 2799397
## 1294 2799370 2801514
## 1296 2802837 2804039
## 1299 2807639 2808376
## 1302 2809449 2810621
## 1306 2814534 2814962
## 1314 2823854 2824417
## 1315 2824414 2825373
## 1316 2825384 2825755
## 1319 2827069 2827842
## 1322 2830498 2831937
## 1327 2837546 2839003
## 1329 2840595 2841065
## 1330 2841058 2841468
## 1331 2841465 2842232
## 1332 2842232 2842774
## 1333 2842784 2844493
## 1334 2844511 2845434
## 1335 2845437 2847263
## 1338 2848669 2849019
## 1339 2849023 2849895
## 1340 2849886 2850158
## 1341 2850158 2851279
## 1348 2859452 2860360
## 1350 2861615 2862253
## 1355 2866915 2867541
## 1356 2867535 2868296
## 1357 2868277 2869326
## 1358 2869323 2869802
## 1359 2869802 2870512
## 1363 2939258 2939653
## 1366 2941359 2942564
## 1372 2948657 2950483
## 1373 2950483 2954025
## 1375 2957082 2960450
## 1376 2960463 2960786
## 1377 2960771 2961178
## 1378 2961175 2961738
## 1380 2962383 2963177
## 1382 2964210 2966456
## 1388 2970691 2971884
## 1395 2980519 2981280
## 1400 2986524 2987333
## 1402 2987841 2987921
## 1407 2994394 2995299
## 1410 2998367 3000625
## 1411 3000636 3001514
## 1417 3008050 3009435
## 1419 3010636 3012261
## 1422 3014082 3017180
## 1424 3018562 3019341
## 1426 3022373 3023773
## 1427 3023788 3025107
## 1429 3026546 3027034
## 1431 3029389 3030837
## 1434 3031679 3033196
## 1436 3034395 3036128
## 1437 3036134 3036844
## 1440 3038438 3038845
## 1448 3047182 3047571
## 1450 3049137 3050339
## 1451 3050362 3051540
## 1452 3051537 3052862
## 1460 3058872 3061016
## 1461 3061009 3062004
## 1462 3062015 3062800
## 1471 3071998 3072711
## 1472 3072708 3073217
## 1473 3073239 3074204
## 1474 3074201 3075478
## 1475 3075493 3076881
## 1480 3081957 3083933
## 1487 3089156 3089887
## 1489 3090959 3091522
## 1495 3291422 3293458
## 1496 3293416 3293811
## 1497 3293831 3294421
## 1504 3298277 3298780
## 1506 3299507 3300502
## 1510 3303993 3305882
## 1515 3309855 3310799
## 1517 3311364 3314036
## 1518 3314061 3315548
## 1523 3320755 3322092
## 1529 3557870 3558628
## 1530 3558645 3559475
## 1533 3562157 3564604
## 1534 3564623 3566056
## 1535 3566056 3567351
## 1536 3567369 3569342
## 1540 3573744 3575084
## 1547 3581506 3581781
## 1553 3585393 3586136
## 1554 3586133 3587203
## 1555 3587205 3588050
## 1558 3590747 3591460
## 1559 3591462 3592229
## 1560 3592226 3593503
## 1561 3593500 3594426
## 1566 3599051 3600109
## 1567 3600102 3600770
## 1569 3602416 3603012
## 1580 3611690 3613264
## 1581 3613264 3614208
## 1582 3614205 3615038
## 1583 3615038 3615802
## 1584 3615799 3616605
## 1586 3617215 3621450
## 1589 3623702 3624826
## 1590 3624826 3627561
## 1599 3640403 3641155
## 1605 3646958 3648247
## 1615 3657255 3658412
## 1623 3670437 3671336
## 1632 3683723 3687196
## 1633 3687178 3688284
## 1634 3688291 3690630
## 1637 3694481 3696052
## 1638 3696049 3696240
## 1642 3699887 3700891
## 1643 3700888 3701871
## 1644 3701882 3702784
## 1650 3711115 3711678
## 1659 3718703 3719224
## 1661 3720351 3722420
## 1665 3724947 3725384
## 1670 3730224 3731765
## 1678 3740756 3741754
## 1680 3742351 3742824
## 1681 3742827 3744104
## 1682 3744117 3745103
## 1683 3745107 3746603
## 1684 3746600 3747262
## 1685 3747255 3748115
## 1689 3750986 3752122
## 1693 3756040 3757884
## 1696 3760206 3764339
## 1699 3768266 3769402
## 1702 3772447 3773595
## 1706 3775422 3777077
## 1707 3777077 3777853
## 1719 3820129 3820404
## 1725 3830242 3832560
## 1736 3845328 3846647
## 1737 3846657 3848159
## 1739 3848825 3849115
## 1744 3853137 3853634
## 1745 3853631 3853993
## 1748 3854934 3856427
## 1759 3869873 3871021
## 1760 3871018 3871635
## 1761 3871619 3872497
## 1766 3875728 3878142
## 1767 3878171 3879244
## 1768 3879244 3880344
## 1770 3882359 3882499
## 1771 3882516 3882875
## 1772 3882839 3883096
## 1778 3889638 3890813
## 1780 3891904 3892653
## 1784 3895529 3895996
## 1786 3896694 3897416
## 1787 3897431 3898600
## 1789 3900312 3901724
## 1792 3904876 3905601
## 1794 3906572 3907462
## 1799 3913576 3913995
## 1800 3914016 3915398
## 1802 3916339 3917880
## 1803 3917893 3918426
## 1805 3918973 3919212
## 1806 3919259 3920074
## 1813 3926175 3927626
## 1816 3931374 3931793
## 1817 3931801 3933306
## 1818 3933311 3934276
## 1820 3935317 3936246
## 1822 3937208 3938635
## 1829 3950224 3950487
## 1831 3951501 3953351
## 1841 3965939 3967042
## 1843 3968156 3969286
## 1844 3969283 3970545
## 1845 3970545 3971612
## 1846 3971631 3972512
## 1847 3972490 3973164
## 1848 3973169 3974299
## 1849 3974301 3975551
## 1850 3975548 3976627
## 1851 3976624 3977976
## 1856 3984709 3985905
## 1857 3985908 3987089
## 1858 3987111 3987851
## 1862 3992545 3992748
## 1863 3992785 3993609
## 1864 3993606 3994313
## 1865 3994310 3995206
## 1870 4000442 4000822
## 1878 4007193 4008215
## 1886 4016878 4017633
## 1887 4017647 4018252
## 1889 4019968 4020237
## 1890 4020241 4020756
## 1891 4020759 4021535
## 1894 4023011 4024504
## 1896 4025632 4026795
## 1898 4029184 4030515
## 1899 4030515 4031129
## 1900 4031168 4032619
## 1902 4038929 4039456
## 1905 4040438 4041424
## 1914 4051892 4053301
## 1918 4058470 4059180
## 1922 4062386 4063789
## 1923 4063832 4065217
## 1926 4068538 4069779
## 1927 4069796 4070674
## 1929 4071762 4072658
## 1931 4073576 4074175
## 1932 4074169 4075041
## 1933 4075038 4075475
## 1937 4078322 4079251
## 1938 4079248 4079883
## 1939 4079880 4080782
## 1943 4086130 4087878
## 1944 4087878 4088948
## 1945 4088938 4090389
## 1947 4091147 4091461
## 1949 4092746 4094005
## 1957 4101625 4102998
## 1967 4110990 4111289
## 1971 4113737 4115245
## 1976 4118439 4119770
## 1983 4175381 4175764
## 1985 4176470 4176898
## 1992 4188758 4189891
## 1993 4189888 4190658
## 1994 4190660 4190860
## 1995 4190844 4191599
## 1996 4191592 4192227
## 1999 4194926 4195699
## 2000 4195739 4196803
## 2001 4196813 4197484
## 2003 4198304 4198576
## 2006 4199949 4201346
## 2008 4202665 4203954
## 2013 4213501 4215102
## 2026 4234285 4234923
## 2027 4234920 4235657
## 2032 4240649 4241539
## 2038 4250529 4251026
## 2042 4255138 4255746
## 2046 4258344 4258598
## 2056 4268261 4268677
## 2067 4281276 4282925
## 2070 4285787 4287223
## 2071 4287268 4287834
## 2072 4287831 4288502
## 2074 4289535 4291193
## 2075 4291186 4291569
## 2080 4297587 4299053
## 2081 4299050 4301101
## 2082 4301101 4302132
## 2085 4304893 4305822
## 2086 4305806 4306501
## 2087 4306512 4307492
## 2093 4312367 4313125
## 2094 4313127 4313561
## 2095 4313548 4314105
## 2096 4314105 4315241
## 2098 4316029 4316787
## 2099 4316784 4317629
## 2100 4317622 4318686
## 2101 4318686 4319270
## 2102 4319267 4319719
## 2104 4321359 4322375
## 2108 4325158 4327386
## 2112 4330204 4331295
## 2113 4331305 4331973
## 2124 4347338 4348057
## 2126 4349866 4350096
## 2128 4350607 4350903
## 2135 4360756 4361331
## 2136 4361368 4363065
## 2142 4368711 4369004
## 2153 4377030 4377389
## 2154 4377400 4377795
## 2155 4377806 4378540
## 2159 4383416 4383730
## 2161 4384070 4387393
## 2167 4392089 4393636
## 2168 4393608 4394069
## 2169 4394088 4395425
## 2170 4395435 4397282
## 2174 4400061 4401320
## 2178 4404213 4404638
## 2181 4408156 4408557
## 2183 4409325 4409984
## 2184 4410002 4410400
## 2185 4410410 4411048
## 2193 4418003 4419400
## 2194 4419416 4419721
## 2195 4419731 4420195
## 2196 4420209 4420859
## 2197 4420869 4421723
## 2200 4423141 4423536
## 2201 4423543 4423857
## 2202 4423862 4424089
## 2218 4440405 4442138
## 2219 4442135 4445914
## 2221 4446470 4446721
## 2225 4449081 4450583
## 2226 4450594 4451619
## 2240 4469009 4469470
## 2241 4469483 4470418
## 2252 4479005 4481860
## 2255 4484241 4485341
## 2260 4490610 4491374
## 2264 4496295 4496660
## 2268 4502081 4503298
## 2269 4503310 4504428
## 2272 4508713 4509480
## 2273 4509481 4510437
## 2274 4510434 4511432
## 2275 4511429 4512331
## 2277 4514787 4515740
## 2282 4520150 4522117
## 2283 4522128 4523033
## 2285 4524129 4524911
## 2286 4524928 4525560
## 2288 4526134 4526940
## 2289 4526953 4528266
## 2290 4528278 4528556
## 2293 4531262 4531807
## 2296 4535682 4536788
## 2301 4541751 4542290
## 2303 4543119 4545755
## 2304 4545765 4546295
## 2305 4546308 4546811
## 2314 4556377 4557549
## 2315 4557562 4558023Halobacterium <- read.table("C:/Users/Chris/git-test/BInfo_528_Assignment4/Halobacterium_NRC1.ptt", sep="\t", header=TRUE, skip=2, fill=TRUE)
Halobacterium <- na.omit(Halobacterium)
# Function to split and convert a single value
extract_numbers <- function(value) {
parts <- unlist(strsplit(value, "\\.."))
return(as.numeric(parts))
}
# Apply the function to the Location column and transpose the result
numbers <- sapply(Halobacterium$Location, extract_numbers)## Warning in FUN(X[[i]], ...): NAs introduced by coercionnumbers_df <- t(as.data.frame(numbers))
# Check if 'numbers' is created correctly
# Assign the first and second columns of 'numbers' to Start and End
Halobacterium$Start <- as.numeric(numbers_df[, 1])
Halobacterium$End <- as.numeric(numbers_df[, 2])
# Loop through each row of the df
Halobacterium_operon=data.frame()
for(i in 1:(nrow(Halobacterium) - 1)) {
# Check strands are the same and not NA
if(!is.na(Halobacterium$Strand[i]) && !is.na(Halobacterium$Strand[i + 1]) && Halobacterium$Strand[i] == Halobacterium$Strand[i+1]) {
# Corrected distance calculation
if(!is.na(Halobacterium$Start[i+1]) - !is.na(Halobacterium$End[i]) < 50) {
# Append row if conditions are met
Halobacterium_operon <- rbind(Halobacterium_operon, Halobacterium[i, ])
}
}
}
# Print the results
print(Halobacterium_operon)